Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1163 |
Symbol | |
ID | 5053922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1215995 |
End bp | 1217584 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640471335 |
Product | gamma-glutamyltransferase |
Protein accession | YP_001155943 |
Protein GI | 145589346 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATTT CCCCTCCCTT TGGTGGCGGC CGCGCCCCAG TCCTCGCTAA AAATGCCGTA GCCAGCTCAC AGCCTTTAGC CACTCAAGCG GGTATTGAGG CCTTGCAAAA TGGTGGCAAT GCCGTAGATG CCGCCTTAGC AACCGCAATC ACACTGACCG TTGTTGAGCC CACCATGAAT GGCTTAGGGG GCGATGGCTT TGCCTTGATT TGGGATGGCA AAAAACTCCA TGGCATGAAT GCCTCTGGTC GCGCTCCGGC CGCCTGGACT CCGGAATACT TTTCTGGCAA AGCGGCAATG GATCTGATTG GTTGGAATAC CGTGACTGTT CCAGGCATGG TTTCTGGTTG GATTGAGCTC TCGCGTAAAT TCGGCAAACT GCCTTTTGCG CAACTCTTTA AACGCGCCAT TGATTATGCG GAGAATGGTT TTCCAGTTTC ACCGGTAATT GCACGTCAAT GGCGTGAAGC CATTCCGATT CTAAAAAATC AACCTGGGTT TACTGAGTCT TTTTTGATTG ATGGCAAAGC GCCTACAGCT GGTCAACTCT GGCGCTACCC TGCGCAGGCA AAAACTTTGC GCGAGATCGC TGACACTGAA GGCGAATCTT TTTACAAAGG TCCTCTTGCA AAAAGTATGG TGGACTTTGC TCAGGCTACT GGTGGTTGTT TGACGATGCA AGACTTTGCA GACAACAAGC CAGACTGGGT CGAACCTCTA GCATTTGATT ATGGCGAATA CACCCTTCAT GAAATCCCCC CCAATGGCTC TGGTATTGCA GCCCAAATGG CTTTAGGGAT TTTGCAAGCA GCCAATGCAA AACAATATCC CGCAAATTCT GCGCAACGTA TTCATTTGCA GATCGAAGCA ATGAGGCTGG CTTTTGCGGA TGTCTACACC TATCTATCAG ATGCGCGCTC AATGCAAGTA CCGGTAACTT CGCTCTTAGA TCGCGATTAT TTGGCGACTC GCGCCGTATT AATTGATCAT CAAAAAGCGG GCACCTATAG CGCAGGTGAT CCCCACTCTG GCGGCACTGT TTATCTATGC GCCGCCGATG AATCCGGCAT GATGATTTCT TATATTCAGT CTAACTTTAA AGGCTTTGGT TCAGGTGTAG TTGCGCCAGG TGGCATCGCC TTTCATAACC GCGGCATGAG CTTTAGCTTA CAAGAAGGCC ACCCGAACCA AGTATCACCA GGTAAGCGGC CCTTCCACAC TATTCTTCCC GCTTTTCTCA CCAGGGATGG TAAGCCATCG ATGGCTTTTG GTGTGATGGG CGGCAATATG CAACCTCAAG GTCATATCCA GTTTGTGATG CGTTTTGTAG ATGAGTACCT GAACCCACAA GCCTGCTCTG ATGCCCCTCG TTGGCGTATT GATGATCTTG GCAAACTGAC AGTTGAAGCT GCGATGCCCC AAGGAGTGGT TGATGGTTTA AGGGCGCTTG GTCATGAAGT GGCAGTCCAG CCAACGAATA GCCTAGACTT TGGAAGCGCT CAAGCAATTG CTAAATTGAC TGAAGATGTT CACTCAGCTT TTATCGCTGG CAGCGATCAC CGCCGAGATG GATTAGCTGC AGGCTTTTAA
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Protein sequence | MLISPPFGGG RAPVLAKNAV ASSQPLATQA GIEALQNGGN AVDAALATAI TLTVVEPTMN GLGGDGFALI WDGKKLHGMN ASGRAPAAWT PEYFSGKAAM DLIGWNTVTV PGMVSGWIEL SRKFGKLPFA QLFKRAIDYA ENGFPVSPVI ARQWREAIPI LKNQPGFTES FLIDGKAPTA GQLWRYPAQA KTLREIADTE GESFYKGPLA KSMVDFAQAT GGCLTMQDFA DNKPDWVEPL AFDYGEYTLH EIPPNGSGIA AQMALGILQA ANAKQYPANS AQRIHLQIEA MRLAFADVYT YLSDARSMQV PVTSLLDRDY LATRAVLIDH QKAGTYSAGD PHSGGTVYLC AADESGMMIS YIQSNFKGFG SGVVAPGGIA FHNRGMSFSL QEGHPNQVSP GKRPFHTILP AFLTRDGKPS MAFGVMGGNM QPQGHIQFVM RFVDEYLNPQ ACSDAPRWRI DDLGKLTVEA AMPQGVVDGL RALGHEVAVQ PTNSLDFGSA QAIAKLTEDV HSAFIAGSDH RRDGLAAGF
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