| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1161 |
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| Symbol | |
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| ID | 5053897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1214015 |
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| End bp | 1214740 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471333 |
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| Product | LrgB family protein |
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| Protein accession | YP_001155941 |
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| Protein GI | 145589344 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAAA AACATTCCAT TGTAGAAATT TGGGTTTACC TTTCTGGTAG CCCCTTATTT
GCTCTCTTCA TTACCTTGGC CGCTTATCAA ATTGGATTGA CGATATATAA GCACTCAAAA
CAAAATCCCC TGGCCAATCC TGTAGCCATT GCTATTTTGA TTGTGGCTAC CCTCATTCAA
ACCATTGAGA TGCCCTACTC CACTTACTTT GAGGGCGCTC AATTTATTCA TTTCCTACTG
GGATCTGCAA CCGTTTCTCT TGCGATACCG ATATACCGCG GCTTGAGCAG TCTTAAAGGA
AGATCCATTC CGTTGATAGC CTCGCTTTGT ACGGGCGGCT TAGTCTCTAT CTTTAGTGCT
GTAGGCATCG CCAGCTTTTT GGGGGCGGAT TCCAGTATTA CTGGTGCGAT GTACCCCAAA
TCAGTGACAG CGCCGATTGC CATGGGTATT GCAGAACGTA TTGGCGTGTC ACCAACCTTA
ACGGCAATAT TTGCAGTCAT CACCGGCATT CTAGGTGCTA TCTTGGCGCC TTTTGTGCTC
AATGCCTTAG GCATGAAAGC GTGGTGGCAA AGAGGCTTTG CCATCGGCAT TGGCGCACAT
GGAATCGGCA CCTCGCGAGC ATTTAGCATT CATCCAGAAG CGGGAACCTA TGCTAGTTTA
GCCATGGGTA TGAATGGCGT GATTAGCGCA GTAGCCATTC CGACTCTCTA CCACCTGTTT
AATTAG
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| Protein sequence | MNEKHSIVEI WVYLSGSPLF ALFITLAAYQ IGLTIYKHSK QNPLANPVAI AILIVATLIQ
TIEMPYSTYF EGAQFIHFLL GSATVSLAIP IYRGLSSLKG RSIPLIASLC TGGLVSIFSA
VGIASFLGAD SSITGAMYPK SVTAPIAMGI AERIGVSPTL TAIFAVITGI LGAILAPFVL
NALGMKAWWQ RGFAIGIGAH GIGTSRAFSI HPEAGTYASL AMGMNGVISA VAIPTLYHLF
N
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