| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1064 |
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| Symbol | |
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| ID | 5053507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1068610 |
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| End bp | 1069179 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471232 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001155844 |
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| Protein GI | 145589247 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.148021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCAG CCCAAGAACT ATCTGACTTT CTGAGTAGCG TCGAGCAGCG TGCTTTCAAG
CAAGCGGTTT ACGCCGTGCG CGATGATGAT GCGGCGATGG ATATTGTTCA AGATGCAATG
ATCAAATTGG CTGAAAAATA TGCCGATCGA CCTGCGGCAG AACTGCCACT GGTTTTCACC
AGAATTTTGC AAAACCGCAT ACACGACTGG TTTAGGCGAC AAAAGGTTAG AAATACATGG
GTCACCTTGT TTTCCAGTAT GGGCAAAAAA ACGGATGAAA ACGATGATTT TGACCCTCTT
GAGTCACTTT CTGCCCCTGA CGAGAGCGAA ATTCACCAAG ATGGAGCGCA AAAACTAGAA
CAGAGTCAGC TATTACAGGC TTTAGAGTCA GAAATATCAA AATTGCCCGT ACGTCAACGA
GAAGCCTTCC TGATGCGTTA TTGGGATGAG CTAAGTATTA CTGAAACTGC CAAAGCGATG
AGTTGTAGCG AAGGCAGCGT CAAAACCCAT TGCTCTCGAG CAACCCAAAC CTTAGCTAAA
GCATTGAAAT TAAAAGGAAT TACGCTGTGA
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| Protein sequence | MASAQELSDF LSSVEQRAFK QAVYAVRDDD AAMDIVQDAM IKLAEKYADR PAAELPLVFT
RILQNRIHDW FRRQKVRNTW VTLFSSMGKK TDENDDFDPL ESLSAPDESE IHQDGAQKLE
QSQLLQALES EISKLPVRQR EAFLMRYWDE LSITETAKAM SCSEGSVKTH CSRATQTLAK
ALKLKGITL
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