Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1053 |
Symbol | tpiA |
ID | 5053441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1056379 |
End bp | 1057137 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640471221 |
Product | triosephosphate isomerase |
Protein accession | YP_001155833 |
Protein GI | 145589236 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACCAC TTATCGTCAT TGGCAACTGG AAAATGAACG GCAATCTTGC TAGTAATCAA GATTGGGTCA AGACCGTTGC CCGTGGCATG GAAAGTGGCA TGCCAGCCGG ACGTAAGTTT GCTGTATGTC CGTCATTTCC GTATTTATCT CAATGTTCTA CTTTGATTAA AGAGCATTCT TTAGCTTTTT TAAGCTTAGG CGCTCAAGAT GTTTCTGCTC ATGGCGCTGG TGCTTATACC GGTGAAGTAG GCGCATCCAT GCTAAAAGAA ATGGGTTGTG AATACGTCAT TGTTGGGCAT TCAGAGCGTC GCCAGATGCA TCAAGAGGCT GATGAGTCTG TCGCAGCTAA AGCATTGCAG GCATTAGATA GCGGCATGAC GCCAGTGATT TGTGTCGGTG AAACTGCTGA CGAGCGTAAC TCGGGTAGGG CGGAAGAGAT TGTTTGCTCC CAAGTGGCTA AACAGGTATC AGTTCTTCAG GATCGATTGG CTGATTGCTT GATTGCTTAT GAGCCTGTTT GGGCTATTGG CACTGGAAAA GTAGCTAGCG CTCAAGTGGC GCAAGATATG CATCGTGCAA TTCGTATGCA ATTAGCCGAA TTTGATGAAG ATGTAGCGTC ACATGTTGGA ATTTTGTATG GCGGCAGCGT CAAGCCTGAT AATGCTGTCG AATTATTTGC AATGCCAGAT ATTGATGGTG GATTGGTTGG GGGTGCTTCA CTAAATCCGC AAGACTTTCT GGCCATCTGT CAGGCATAG
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Protein sequence | MRPLIVIGNW KMNGNLASNQ DWVKTVARGM ESGMPAGRKF AVCPSFPYLS QCSTLIKEHS LAFLSLGAQD VSAHGAGAYT GEVGASMLKE MGCEYVIVGH SERRQMHQEA DESVAAKALQ ALDSGMTPVI CVGETADERN SGRAEEIVCS QVAKQVSVLQ DRLADCLIAY EPVWAIGTGK VASAQVAQDM HRAIRMQLAE FDEDVASHVG ILYGGSVKPD NAVELFAMPD IDGGLVGGAS LNPQDFLAIC QA
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