| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1000 |
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| Symbol | |
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| ID | 5052918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 995720 |
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| End bp | 998170 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471165 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001155780 |
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| Protein GI | 145589183 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AAAAACTCGT CATGATTGGC AATGGGATGG CCGGCGTTCG GACCATCGAG
GAACTATTAA AGCTCGACCC AGAGCTTTAT GACATCACCA TCTTTGGTGC TGAGCCCCAT
CCCAACTACA ACCGTATTTT GCTGTCCCCA GTATTGGCCG GCGAACAGAC TCTTGAGCAA
ATTGTTCTAA ATGACCTCGA TTGGTACAAG AGCAATGGCA TCCATCTTCA TCTTAGCAAA
ACCATAACTA AGATTGATCG CAAAGAGCGT ACTGTTATTG CCGATGATGG CACCATTGAA
AGCTACGATC GCTTATTACT GGCTACCGGC TCTTTACCAT TCATCTTGCC TGTTCCAGGA
AATGACTTAC CTGGCGTGAT TGCGTATCGT GATATTAAAG ATACCAACGA GATGATTGAT
GTGGCGACGC GTTACAAAAA TGCCGTAGTC ATTGGTGGTG GCCTGCTTGG TCTCGAAGCT
GCAAACGGTC TAGCTCTCAG AGGTATGAGT GTGACCGTGG TCCATCTTGC CGAATGGTTG
ATGGAAAGAC AGCTAGATAA AACAGCAGCT GATTTACTAC AAAAATCCTT GGAAGAAAAA
GGTCTTAAGT TTTTACTGAA AACTTCTACC GAGGCAATTA CCCCTAATGC CGCCGGCGAT
CGTGTCGGCC ATATCCGCTT TAAAGGTGGG CTAGAAATAC CGGCTGACTT AGTTGTTATG
GCGGCGGGTA TTAAGCCCAA TACAGCTTTA GCCGAATCTG CAGGTTTACA TTGCCAAAGA
GGTATCGTTG TTAACGATAC TCTGCAAACG TTTGATCCAA GAGTTTATGC AGTTGGTGAG
TGTGCAAGCC ATCGTGGAAC TGCCTATGGT TTAGTTGCGC CTTTATTTGA GCAGGCTAAG
GTTTGTGCAA ATCACCTTGC CGAACACGGT ATCGGTCGAT ATGAGGGCTC CGTAACGTCA
ACAAAACTGA AAGTAACGGG CGTCGATCTC TTCTCCGCTG GAAACTTTAT GGGAGGCGAA
GGTACTGAAG AAATTACTCT AGCCGATCCT ATTGGTGGCG TGTATAAAAA ATTAGTTTTA
AAAGATGATC GTTTAATTGG CGCCTGCATG TTTGGCGATA CAGCAGATAG CACTTGGTAT
TTCAAGCTCA TGCGTGACGA ACAAAGCATT GCAGAAATTC GTGACACATT GATGTTTGGT
GAATCCAATA TTGGTGATGT TGGCCATCAA GGTCACAATA AAGCGGCCGG AATGACTGAT
GCAGATGAAA TTTGCGGATG CAACGGGGTT ACCAAAGGCA CCATTGTCAA GGCTATTCGG
GAACAGGGTT TATTCACGCT TGATGAAGTA AAGAAATGTA CTAAAGCAAG CAGCTCCTGT
GGCTCATGTA CAGGCCTAGT TGAGCAAGTG CTGATGAATG TTCTTGGCAC AGACTATTCA
GCAACCCCTA GAAAGAAATC AATTTGTGGA TGCTCCGATC TTTCTCATGA TGAAATTCGT
CAAGCCATAC GCTCCGGTCA CTTAATTTCT CAAGAGCAAG TTCGCACCGA GCTGAATTGG
AGAACACCTA ACGGTTGCGC GACTTGTCGC CCTGCCTTAA ATTATTATTT GATCTCCACA
TGGCCACATG AAGCAAAAGA TGATCCACAA TCCCGCTTCA TTAATGAACG TGCTCATGCC
AATATCCAGA AAGATGGCAC CTACTCAGTT ATTCCGCGGA TGTTTGGTGG TCTAACTACT
CCTTCTGAAC TACGAAGAAT TGCTGACGTT GCTGAGAAAT ACCAAGTGCC CACAGTGAAG
GTCACTGGCG GCCAACGAAT TGACTTACTT GGCATCAAGA AGGATGATCT CCCAGCGGTT
TGGAAAGAGT TGGATATGCC GTCAGGTCAT GCCTATGGCA AATCAATTCG CACAGTGAAA
ACTTGTGTTG GTGATGAGCA CTGTCGTTTT GGTACCCAGT CCTCCATGAA AATGGGCGTA
GATCTAGAGA GAATGCTCTT TGGTATGTAC GCACCTCACA AAGTGAAGCT TGCAGTATCT
GGCTGCCCAC GAAACTGCGC AGAAGCTGGC ATCAAAGATG TTGGAATCAT TGGTGTTGAA
TCTGGCTGGG AACTCTATAT TGGTGGTAAC GGCGGCATTA AAACTGAAGT AGCGGAATTT
CTCTGTAAAG TTAAAACTGA TGAGGAAGTT CGTGAATATT CTGGTGCCTT CTTACAGCTG
TACCGCGAAG AAGCTTGGTA TTTGGATCGA ACTGTCCATT ACTTGGCAAG AGTTGGCATG
GAATACATTA AGCAAAAAGT GGTCGACGAT GCTGAAAGTC GTAAAGCTCT CTACGAAAGA
CTGCTGTTTG ATCTAAAAGA TGCTCCAGAT CCCTGGAAAG ACTTTGAACG TGCTGGTGTA
GATGTTCGTC AATTTAAAAC CATCCCTATT GTCGAGGTTG GAAATGTCTA A
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| Protein sequence | MKKQKLVMIG NGMAGVRTIE ELLKLDPELY DITIFGAEPH PNYNRILLSP VLAGEQTLEQ
IVLNDLDWYK SNGIHLHLSK TITKIDRKER TVIADDGTIE SYDRLLLATG SLPFILPVPG
NDLPGVIAYR DIKDTNEMID VATRYKNAVV IGGGLLGLEA ANGLALRGMS VTVVHLAEWL
MERQLDKTAA DLLQKSLEEK GLKFLLKTST EAITPNAAGD RVGHIRFKGG LEIPADLVVM
AAGIKPNTAL AESAGLHCQR GIVVNDTLQT FDPRVYAVGE CASHRGTAYG LVAPLFEQAK
VCANHLAEHG IGRYEGSVTS TKLKVTGVDL FSAGNFMGGE GTEEITLADP IGGVYKKLVL
KDDRLIGACM FGDTADSTWY FKLMRDEQSI AEIRDTLMFG ESNIGDVGHQ GHNKAAGMTD
ADEICGCNGV TKGTIVKAIR EQGLFTLDEV KKCTKASSSC GSCTGLVEQV LMNVLGTDYS
ATPRKKSICG CSDLSHDEIR QAIRSGHLIS QEQVRTELNW RTPNGCATCR PALNYYLIST
WPHEAKDDPQ SRFINERAHA NIQKDGTYSV IPRMFGGLTT PSELRRIADV AEKYQVPTVK
VTGGQRIDLL GIKKDDLPAV WKELDMPSGH AYGKSIRTVK TCVGDEHCRF GTQSSMKMGV
DLERMLFGMY APHKVKLAVS GCPRNCAEAG IKDVGIIGVE SGWELYIGGN GGIKTEVAEF
LCKVKTDEEV REYSGAFLQL YREEAWYLDR TVHYLARVGM EYIKQKVVDD AESRKALYER
LLFDLKDAPD PWKDFERAGV DVRQFKTIPI VEVGNV
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