| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0889 |
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| Symbol | |
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| ID | 5053842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 881968 |
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| End bp | 882849 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471048 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001155669 |
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| Protein GI | 145589072 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000698623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAC TTCTTCCCAC TTCTATACAG ATCCCTAAAG TATTGACCAT TGCTGGGTCC
GATAGCGGCG GCGGGGCGGG GCTTCAAGCC GACCTCAAGG TGATTACAGC CCTAGGTGGA
TATGGAATGT CCGTCATTAC CGCCATAACT GCCCAAAACA CTTTGGGAGT GACGCGGATT
CAGGATGTCG ACCTTGATGT CGTTGAGGCT CAGATTGATG CCGTTTTAAT GGATATTGGT
GCTGATATTG TCAAGATAGG AATGTTAGCC AGCCCGGAAA TAGTGCGAAC CGTAGCCAAA
GCTCTGCGTC GTCATGGCGT CAAAAGAATC ATTTTGGATC CAGTACTGAG GGCAACATCA
GGGGCGAGTT TAGGCGGTGA TGACACTGCC CAAGCGATGA TTGCTGAATT GTTTCCAATC
GCTTCACTCG TTACGCCAAA TTTAGAAGAA GCCTCTCTAT TACTAGGAAG AGAAATTAGC
GGGCCAAATG ATTTCAAATT AGCTGCACAA GAACTGCTTG ATATGGGGCC TCAAGCGGTC
CTTATTAAAG GTGGACATCT CGACTCGACG CATACACAAA TAACGGATTT CCTAATGTGG
AGAAGCGTTG AAGATGAATT AGAAGTAATT CTGACAAAAG AATTTAAGCA CTATCGCGTG
AACACAATCA ATACACATGG AACGGGTTGT ACTTTAGCTT CCGCTATTGC TACTTACTTG
GCTGATGGAC ATGATTTACT GCACTCAGTT GCTAAAGCCA TTGCTTATGT AGAGGCTGGC
CTAGAAGCCG GGCGCTTTTT AAGTATTGGC GAGGGGCCAG GACCGCTCTG GCATATGCAT
GATTTCTACC CAACTGCATT GGCAAAAGAA AAAGGTATTT AA
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| Protein sequence | MQSLLPTSIQ IPKVLTIAGS DSGGGAGLQA DLKVITALGG YGMSVITAIT AQNTLGVTRI
QDVDLDVVEA QIDAVLMDIG ADIVKIGMLA SPEIVRTVAK ALRRHGVKRI ILDPVLRATS
GASLGGDDTA QAMIAELFPI ASLVTPNLEE ASLLLGREIS GPNDFKLAAQ ELLDMGPQAV
LIKGGHLDST HTQITDFLMW RSVEDELEVI LTKEFKHYRV NTINTHGTGC TLASAIATYL
ADGHDLLHSV AKAIAYVEAG LEAGRFLSIG EGPGPLWHMH DFYPTALAKE KGI
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