Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0835 |
Symbol | |
ID | 5052173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 830222 |
End bp | 830545 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470993 |
Product | integration host factor, alpha subunit |
Protein accession | YP_001155617 |
Protein GI | 145589020 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TGATTTCGAG TGACACCGTT ACCAAGAATG AGCTTTCTGA AGCTCTTTTT GATCAAGTGG GTTTGAACAA GCGTGAAGCC AAAGACATGA TTGATGCTTT TTTTGATCGC ATTGGTCAAT CTCTTGAGGC TGGCACAGAA GTGAAGATTT CTGGTTTCGG CAATTTCCAG TTGCGCAATA AATCGGCTCG TCCTGGCCGA AATCCAAAGA CAGGTCAAAT GATTCCCATT GCCGCACGAC GCGTAGTTAC TTTTCACGCT AGTCAAAAGC TTAAAGATGT AGTGGAGTCT CATGCTCGAG AAAACAGAGT TTGA
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Protein sequence | MTELISSDTV TKNELSEALF DQVGLNKREA KDMIDAFFDR IGQSLEAGTE VKISGFGNFQ LRNKSARPGR NPKTGQMIPI AARRVVTFHA SQKLKDVVES HARENRV
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