Gene Pnuc_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0798 
Symbol 
ID5052963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp792719 
End bp793528 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID640470955 
Producthypothetical protein 
Protein accessionYP_001155580 
Protein GI145588983 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCT TGTTCATTGC CTCAGCACTC GGGGCATTCG TAGGTATTCT GATGGGCCTC 
ACTGGCGCAG GAGGCGGAAT TCTTTCTGTT CCGCTACTCG TCTTTGCTTT TCATATGCCA 
ATGTCCGAAG CGGGGCCCAT TGCCTTAACT GCTATTGCTA TTTCTGCGGG AGTTGGCGCT 
GTTATTGGAT TGAATGCCAA AGTACTTCGC TACAAGGCGG CTATGTTTAT GGCGATTTGC 
GGCCTCATTC TTTCGCCATT GGGTTTATGG GTAGCACAAC GCGCACCCAA TACACCAATG 
CTTTTACTTT TTAGTGCGGT ATTAATTTAT GTTGCTGCGA AAATGTTTGT GCAGGCAACG 
CAAACCATAG CAGGTAAAGC ACCAGAGCTT ACCAAACCAC CGCCTTGTCA ATTAGATATG 
TCTATAGGCA AACTCATCTG GACCGTTCCT TGCGCTCGAT CCCTGATGCT TGCGGGAGCT 
TTTGCTGGAT TTCTTTCGGG TTTATTGGGC GTAGGAGGCG GCTTCATTAT CGTTCCTTCT 
CTCAAGAAAT TTACTGACCT GCCAATGAAG GCTATTGTGG CAACTTCTTT AGGTGTGCTA 
GCAATCGTCT CTGCAGGAGG TGCAGCGGTG TCGCTGGTAT CTGGCACGCT GGACTTAACT 
ATTGCCGCGC CCTTTGCAGT AGGTTCTCTT GTGGGTCTTC TAATTGGAAA AGTATTAGAG 
AAAAATATTA GTGGTCCACG AGTTCAGCAA ATCTTTTCTG TCTTTACTTT TTTAGTTGCA 
CTTAGTCTCA TTTACAAATG CTTTACCTAA
 
Protein sequence
MDSLFIASAL GAFVGILMGL TGAGGGILSV PLLVFAFHMP MSEAGPIALT AIAISAGVGA 
VIGLNAKVLR YKAAMFMAIC GLILSPLGLW VAQRAPNTPM LLLFSAVLIY VAAKMFVQAT 
QTIAGKAPEL TKPPPCQLDM SIGKLIWTVP CARSLMLAGA FAGFLSGLLG VGGGFIIVPS 
LKKFTDLPMK AIVATSLGVL AIVSAGGAAV SLVSGTLDLT IAAPFAVGSL VGLLIGKVLE 
KNISGPRVQQ IFSVFTFLVA LSLIYKCFT