| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0578 |
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| Symbol | |
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| ID | 5052708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 566657 |
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| End bp | 568294 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470730 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001155360 |
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| Protein GI | 145588763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAA ATCAAACTCT CTACTTCAAC GGCAATATTT TAACTATGGC CGGTGATCAG
CCTGAATATG TGGAAGCAGT ATTGGTGACG GACGGGAAAA TCACCTTCAC TGGCAACAAA
AAACAAGCTA GCACTTTGGC CGGTCAAGAC GCCAAGCTAC ATGACTTGCA AGGACATACC
TTAACCCCAG GATTTATTGA TACCTGGGGC CACTTTGGCT TATTTGCTCA ACAAACATTG
AGCTTGAATG TCGGGTACTT TGCAGATAAT CCACCACGCA GCAGATCAGA GTTAATTACA
CAGTTGAAAC AATCTGGCAA GCTCCTCAAC GGATGGCTGA TCGCTGCCGA GTATATGGAT
GGACTAATGA AAGATGGGCC ACTAACTATG GCAGATTTAG ATACAGCCTT TCCGGATACG
CCGGTGCTGG TACAAAATAT TTCAACCTTA GCAGGTTTAT TTAATACAGC AGGCCTCAAA
AAACTTGGCA TTACTGCAGA TGCCAAAGTT GAATCCGGCA CGATCGTAGT TGACCCCAAT
ACCCATCAAA TGACGGGCAT CATTATCGGG CTACCTTATC TCAAGGCAGT TGCAGAAGCC
TATGGAAAGT TTTCCCAAGA CCTCACTTTT AAGACTTATC AAAGTGCAGA GAAAATTTAT
GCTTCCTATG GCACCACTAC TGCTCAGCAT TACCAAGCAA GCCCTGATGA TATTCAATTG
ATGCGTCTAG CTGCTGATAG CGGTGCGGTT TCGATCGATT TAGTGGCTCT TCCAATGAGT
GATACGGTCG ATGCTTTACT AAAAGATAAT CCTGATTTCT CCTTTGGAGT CTATAGCAAA
GGTGATCATG GCTTTAAGGT GGCAGGTATG TTGATGTCCA CAGACGGAGG GCCACAACTC
AAACTTGCTT ATCTTTCAGA GCCCTACAGC AACACTACCG GCTTCCCAGA TGACTGGCGG
GGCATGGCTT ACTATACCCA AGAGCAGGTT GATCACTACA CCAAACTTGC TTACGAAAAA
AATATCCCTT ACTTTTGCTA TAGCAATGGT GATGCCGGAA TTGATATGGC CTTAGCTGCT
ATTAAAAAGG CGATTGCTGA AACCGGGATA ACCGAAGATC GTCGTACGAC TATCTCCCAT
TCTTTTTTTG CGAGAGAAGA TCAATTGAAT GACTACAAAA CCAATCACAT TATTGCAATC
ACCTTATCTA ATCATATGTG GCTATATGGG GATATTTACT TAGATATTGT TGGTCAAGAA
CGTGCCGATA ATTTTTGTCC TATGGTCACA GCACACAACA AAGGGATAGT AGTCGGCATC
CATAATGATG TCCCCTCTTC TGGTCCGGAT TGCCTGTTTA CTATTTGGAG CGCAGTCAAT
CGCAAAACAA TGTCCGGAAA AACATTGGGC GCAAAGGAAA AAATGAATCC CTACCTAGCA
TTACAGGCAT TTACCAGTAA TGCGGCCTAT GTATACCGCG AGGAGAATAC GAAGGGCAAG
ATCATGCCTG GCATGCTGGC TGACTTAGTA GAGTTGGATC AGAATCCTTT AACAGTTGAC
CCTGATACAA TCAAAGATAT CAAAGTGGTC AACACCATAA AAAATGGCAA AGTGATTTAT
TCAAGATCCG CCAACTAA
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| Protein sequence | MTSNQTLYFN GNILTMAGDQ PEYVEAVLVT DGKITFTGNK KQASTLAGQD AKLHDLQGHT
LTPGFIDTWG HFGLFAQQTL SLNVGYFADN PPRSRSELIT QLKQSGKLLN GWLIAAEYMD
GLMKDGPLTM ADLDTAFPDT PVLVQNISTL AGLFNTAGLK KLGITADAKV ESGTIVVDPN
THQMTGIIIG LPYLKAVAEA YGKFSQDLTF KTYQSAEKIY ASYGTTTAQH YQASPDDIQL
MRLAADSGAV SIDLVALPMS DTVDALLKDN PDFSFGVYSK GDHGFKVAGM LMSTDGGPQL
KLAYLSEPYS NTTGFPDDWR GMAYYTQEQV DHYTKLAYEK NIPYFCYSNG DAGIDMALAA
IKKAIAETGI TEDRRTTISH SFFAREDQLN DYKTNHIIAI TLSNHMWLYG DIYLDIVGQE
RADNFCPMVT AHNKGIVVGI HNDVPSSGPD CLFTIWSAVN RKTMSGKTLG AKEKMNPYLA
LQAFTSNAAY VYREENTKGK IMPGMLADLV ELDQNPLTVD PDTIKDIKVV NTIKNGKVIY
SRSAN
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