Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0524 |
Symbol | |
ID | 5052014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 514679 |
End bp | 515932 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470678 |
Product | Ste24 endopeptidase |
Protein accession | YP_001155308 |
Protein GI | 145588711 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0944212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTCA CAATTGTTTT TCTTATTGCA TTTATTGCCA GCTTTGGCTT GCGCCACTGG CTTTCCCAAC GACAAATTCG CTACGTAGCC CAGCACCGTG ATCAGGTTCC AGCTGAGTTT TCTGAAAAGA TCACCTTGGC TGAACATCAA AAAGCTGCCG ACTACACCAT TGCTAAATTA CGACTTGGTA TTTTAGAAAA TGGCGTTAGC GCAATTATAT TAATTGGCTT CACCCTCTTG GGAGGACTGG AAGTCCTGAA TATCACCTTA CTGCAATTAT TGGGTGAAGG CATCACCCAG CAAATTGCTT TACTTGCCTC TATTGCCATT ATTTCTGGAT TGCTTGATTT GCCTTTTTCT TGGTACAAAC AATTTCACCT GGAAGAGCGC TTTGGCTTTA ATCGTATGGG TAAAAAGTTA TTTTTTGCAG ACATGCTTAA AGGTCTTCTT GTGGGTGCCG CAATCGGCAT CCCACTTCTG TGGGTCATTC TCACGCTGAT GGCTAAATCT GGCGATCTAT GGTGGCTTTG GGCTTGGGCT GTGATCACTG TATTTAGCTT GCTCATGCAA TGGATCTTCC CCACCTTTAT TGCGCCCCTC TTTAATAAAT TCCAAGCCTT GGAAGAAGGT GCGCTCAAAA CTCAAATCGA AGCGCTTCTA AAACGTTGCG ACTTTGCAAG CCAAGGTCTG TTTGTGATGG ATGGCAGCAA ACGGAGTGCT CATGGCAATG CTTTTTTTGC GGGCATGGGC AAAGCAAAGC GGATTGTTTT CTTTGACATC TTAATTGAAA AGTTGAACCC CGGTGAAGTA GAGGCCGTAC TGGCGCATGA GCTGGGTCAC TTTAAGTGCA AGCATATCCG CAAGCGTCTA TTGGTTTCTT TTGCCTTAAG CTTTGCTATG TTTGCTTTGC TAGGTTGGAT TAGTACCCAA GTGTGGTTCT ATACTGACCT CGGTGTCATG CCTAACCTCA ATGGCTATAA CGGTGGATTA GCCTTGGCAC TCTTCATGCT CGTATCCCCC GTATTTAGTT TTTTCTTCAC GCCACTTTCT AGTCTAGCTT CTCGTAAACA TGAATATGAG GCCGATGGTT TCGCTGCAGA AAAGTCTTCT GCCAAGGATT TAATTTCTGC CTTAGTCAAA CTCTATCAAG ACAATGCTTC TACTTTGACC CCTGATCCGA TTTATACGGC GTTCTATAGC TCACACCCTC CGGCCCCATT ACGCATTGCT AATCTGCAAC GCTTTAGCTC ATAA
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Protein sequence | MTFTIVFLIA FIASFGLRHW LSQRQIRYVA QHRDQVPAEF SEKITLAEHQ KAADYTIAKL RLGILENGVS AIILIGFTLL GGLEVLNITL LQLLGEGITQ QIALLASIAI ISGLLDLPFS WYKQFHLEER FGFNRMGKKL FFADMLKGLL VGAAIGIPLL WVILTLMAKS GDLWWLWAWA VITVFSLLMQ WIFPTFIAPL FNKFQALEEG ALKTQIEALL KRCDFASQGL FVMDGSKRSA HGNAFFAGMG KAKRIVFFDI LIEKLNPGEV EAVLAHELGH FKCKHIRKRL LVSFALSFAM FALLGWISTQ VWFYTDLGVM PNLNGYNGGL ALALFMLVSP VFSFFFTPLS SLASRKHEYE ADGFAAEKSS AKDLISALVK LYQDNASTLT PDPIYTAFYS SHPPAPLRIA NLQRFSS
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