Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0487 |
Symbol | |
ID | 5052829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 476254 |
End bp | 477108 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470640 |
Product | pirin domain-containing protein |
Protein accession | YP_001155271 |
Protein GI | 145588674 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.974974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCA ATATTCAAAC CATCATCCCT GGCATTGCGA CCTCTGATGG CGCAGGCGTA AAGCTGCGTC GTAGTTTGGG CGGGCAAGAG CAATTGAGGC TTGATCCTTT CTTAATGTTG GATGAGTTTT CTTCAAACGA TCCCAATGAC TATGTGGCGG GTTTTCCTGC ACACCCTCAC CGTGGTTTTG AGACGGTGAC CTATATGCTC GAAGGGCATA TGTTGCATGA GGATCATTTA GGCAATCAGG GGCATTTGAA GACGGGTGGC GTGCAGTGGA TGACAACAGG TCGCGGCATT ATCCACTCTG AAATGCCTCA ACAAGTCAGT GGTGCAATGC GTGGCTTTCA GTTGTGGATA AACCTACCAG CTCAAGAAAA AATGAAGCCT GCAGGATATC AAGATATTCA GGTGGAGGAG ATACCTCGTG TTGAGCTAGA GCACGGTGGC TCTATTAAAG TCATTGCAGG CTCGTATGAA GGTGCTGATG GCGCAATTCA AGGTCCGATA CAAGGCATCA CTACTGCGCC ATTGTTTCTG GACGTAAATT TACCCCCTCA TATCGAGTTT GAGCATCGCA TTGCTAAGGA ATTTAATGCT TTTCTATACC TCTATAAGGG TGAGCTAGAG GTTGGTGGGC CTATGAGACC AGCGCCAACA CAAGCTGCCA TCGTCTTGGG TGATGGTGAT CGTCTCAAGG TGAAGTCTGG TGAAGCAGGT GCACAATTTA TTGTGTTGGC TGCCTTGCCT TTGCATGAGC CCATAGTCCA ATATGGTCCT TTCGTCATGA ACACCCGCGC TGAAATCGAA CAGGCCATTG ATGATTATCA AAATAATCGT TTTGTTATTT CCTAA
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Protein sequence | MIRNIQTIIP GIATSDGAGV KLRRSLGGQE QLRLDPFLML DEFSSNDPND YVAGFPAHPH RGFETVTYML EGHMLHEDHL GNQGHLKTGG VQWMTTGRGI IHSEMPQQVS GAMRGFQLWI NLPAQEKMKP AGYQDIQVEE IPRVELEHGG SIKVIAGSYE GADGAIQGPI QGITTAPLFL DVNLPPHIEF EHRIAKEFNA FLYLYKGELE VGGPMRPAPT QAAIVLGDGD RLKVKSGEAG AQFIVLAALP LHEPIVQYGP FVMNTRAEIE QAIDDYQNNR FVIS
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