Gene Pnuc_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0242 
Symbol 
ID5053501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp242455 
End bp243273 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content42% 
IMG OID640470394 
Producthypothetical protein 
Protein accessionYP_001155027 
Protein GI145588430 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGA TCTTTTTTAT TTTTTCGAAG GTAGTGCAAT TCTGTATTGA GCCCCTCAAT 
TGGGTAATTA TTTTTGTTTC ATTGAGCCTC CTCTTTTTAT CACTCAGAAA ACCCCATCTA 
TGTAAGCGTT TTTTGCTGCT TACCTTATTT GATCTACTTA TTGTTGGTTG GTTACCGAGC 
TCTGAAGTGT TTTTAAGAGC CCTTGAGAAT GCGGTACCAA AAACCAACCT CTCTCAGATA 
GCAGACAGCG ATATCGGGGG AATTATTATT TTGGGTGGTG CCATACAAAG CGGCATGATT 
GGACTAGATC GAGGGGAGGT ACCACTGCAG TCATCAGCAG AACGGGTTAC CAAAGCTCTT 
GAGTTGATTC GAAAGTACCC CAACTTACCC TTTATATTCA GCGGTTACTC TGGTCGTCTC 
AACCCAAAGG GCTTATCTGA AGCAGACGCA TTTAAACAGC TAATTGCAGA GCAGGGCCTG 
AGTCAAGAAA CTGAAAAGAC TGCGCATTAT GAGAATCAAT CTCGTAACAC CTATGAAAAT 
GTGCTGTATT TAAGGCCAAT GATGCAAGAC TTTGGTGCGA GGAGCGAGTC TGGGGCAATA 
CAGCCCTGGC TATTAATTAC TTCCGCTAGT CATATGTATC GTGCTGAAAA GATCTTTCAG 
ATGCAGGGGA TTGAAGTTAT TCCTGTTCCA GTGGATTACC AAACTGCCAA TAGTTTGAAT 
TGGACCTCAT TTGATCTGGA AGATGGTACT CAAAACTGGC ATAAATTGGT TCATGAGGTG 
GTTGGTCTTC TGGCTTATTG GATTACTGGA AAACTATAG
 
Protein sequence
MDTIFFIFSK VVQFCIEPLN WVIIFVSLSL LFLSLRKPHL CKRFLLLTLF DLLIVGWLPS 
SEVFLRALEN AVPKTNLSQI ADSDIGGIII LGGAIQSGMI GLDRGEVPLQ SSAERVTKAL 
ELIRKYPNLP FIFSGYSGRL NPKGLSEADA FKQLIAEQGL SQETEKTAHY ENQSRNTYEN 
VLYLRPMMQD FGARSESGAI QPWLLITSAS HMYRAEKIFQ MQGIEVIPVP VDYQTANSLN 
WTSFDLEDGT QNWHKLVHEV VGLLAYWITG KL