| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0131 |
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| Symbol | |
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| ID | 5053249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 124781 |
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| End bp | 126121 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470283 |
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| Product | general substrate transporter |
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| Protein accession | YP_001154916 |
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| Protein GI | 145588319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000482205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAATA TCAATCACTT AGAAAAATCA GAAAATGCTC ACTCCTATCG AAAGGTGGCC
TTAGCAGCTT GTTTTGGCAC CTTTTTAGAG TGGTATGACT TTCTCACCTT TGCTACCCTA
GCAGTCGTGT TTAGCCCCTT ATTTTTTCCA TCTAGTGATC CCAGTACCGG GCTTTTAGCG
AGTTTGGCTA CCTTTGGTGT TGGGATGGTG GTCAGACCTA TTGGCGCCGC CTTTTTTGGC
TCCCTGGGCG ATCGCATAGG CCGCAAGCCA GTATTTATGG TCACTATTAC GATCATGGGC
CTGGCCACGG TCTGCGTAGG CTTTTTACCA ACCTACGCAC AGATTGGTAT TTGGGCGCCA
ATCTTGTTGG TTGTACTGCG ACTATTGCAA GGACTCTCAG CCGGGGGAGA GATTGGAGGA
AGCGCGGTAT ACCTCACTGA GCATGCGGGC ACTAAAAATC GCGGCTTCAA AACCAGCTTT
CTTCAACTGA TGGGGCCACT AGGCATTTTA TTTTCCACCC TACAAATCGC CTTATTGAGA
AATTACCTCA CTCCAGAAGA ATTTGAATCC TGGGGCTGGC GTGTCCCCTT TTGGATTTCA
ATCATATTGT TGGCTATTGC ATTTAAGGTG CGTATGTCGC TAGAGGAAAC TCCGATTTAC
TTGGAGTTAA TGAATAAAAA CCAAAGGTCT GAAAGCCCAC TGCTTGAGAA TTTCAAAGAC
CCCAAAACAC GCAAGCATAT GTTTTTACTT TTCTTTTGTA TTTCTGCTGG TGGGGCAATT
TTATTTTTTT GTGTTCAGGT ATATACAGCC ATTTATCTTA AGACCTCTAC CAACATTCCT
GCTGAAGTAG TCGACAAGCT GAGCATTTAT GGAACAATTT CTCTTTTATT TTTTACGGTA
TTTGCTGGCT GGCTTTCAGA CAAAATTGGC AGAAAGCCAG TTGTAGTTAG TGGTTTAGTA
CTTGGGGCAG TACTGATCTT GCCGGCATTT GAATTACTCA ATGCACTCGG TAACAATACA
TCTAATCAAA ATAATTCAAA TTATTTGCTT GCGCTGATCC TGATTGGAAT ATCAGGAATC
TTAGGGCTAG TGGTTGGGCC ACAAACTGCT CTACTCGCAG AGCTTTTCCC TGCCAAATCT
CGTAATAGCG CCGCAACACT TCCACATAAT CTGGCCGCAG GCTGGATCGG CGGGCTACTG
CCCCTGATAG TGACTTGGAT TAACCGTGAA TATGGGAACG CCACCGCTGG TTTATGGTAT
CCAACTGCAT TTTTAATTTG CGCTGCAATA ACAGCGCTGA TCTACTTACC AGAAACGGTA
GCAACAAATC TAAGGGAATA A
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| Protein sequence | MNNINHLEKS ENAHSYRKVA LAACFGTFLE WYDFLTFATL AVVFSPLFFP SSDPSTGLLA
SLATFGVGMV VRPIGAAFFG SLGDRIGRKP VFMVTITIMG LATVCVGFLP TYAQIGIWAP
ILLVVLRLLQ GLSAGGEIGG SAVYLTEHAG TKNRGFKTSF LQLMGPLGIL FSTLQIALLR
NYLTPEEFES WGWRVPFWIS IILLAIAFKV RMSLEETPIY LELMNKNQRS ESPLLENFKD
PKTRKHMFLL FFCISAGGAI LFFCVQVYTA IYLKTSTNIP AEVVDKLSIY GTISLLFFTV
FAGWLSDKIG RKPVVVSGLV LGAVLILPAF ELLNALGNNT SNQNNSNYLL ALILIGISGI
LGLVVGPQTA LLAELFPAKS RNSAATLPHN LAAGWIGGLL PLIVTWINRE YGNATAGLWY
PTAFLICAAI TALIYLPETV ATNLRE
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