| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0004 |
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| Symbol | |
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| ID | 5051985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 5352 |
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| End bp | 5846 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640470146 |
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| Product | nuclear protein SET |
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| Protein accession | YP_001154790 |
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| Protein GI | 145588193 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2940] Proteins containing SET domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.437356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCTA AAAAATTAAA ACCACCAAAG GTGGACCGAT CTTCTATTGT TGTTAAATCC
TCACCCATTC ATGGGAAAGG GGTCTTTGTG GCCAAACCAA TTAAAAAGGG GCAGGCCATT
ATTGAATACA AAGGCGAGCG CATTAGTTGG AAGTTGGCTG AAAAGCGCCA TCCACACGAC
CCTAAAGATC CAAATCACAC TTTTTATTTT TCCCTAGAAG ATGGTCGAGT CATTGATGCC
AAATATGGCG GCAATGCAGC GCGCTGGATT AACCATTCTT GCAAACCTAG TTGTGAAACA
CGAGAAGACT CCTTCGAAGG CAAACCTCGG GTGTTTATTT ACGCTAAACG TAGCTTGAAG
GTTGGTGAGG AGTTGTTTTA TGACTACTCC TTGGATGTTG AGGGGCGCAT CAGCAAACAA
ATGAAAAAAG ATTACGAATG TCGTTGTGGC GCAAAAAAGT GTCGCGGGAC CATGCTTGCG
CTTAAAGATA AATAA
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| Protein sequence | MASKKLKPPK VDRSSIVVKS SPIHGKGVFV AKPIKKGQAI IEYKGERISW KLAEKRHPHD
PKDPNHTFYF SLEDGRVIDA KYGGNAARWI NHSCKPSCET REDSFEGKPR VFIYAKRSLK
VGEELFYDYS LDVEGRISKQ MKKDYECRCG AKKCRGTMLA LKDK
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