Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1785 |
Symbol | |
ID | 6183883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1559657 |
End bp | 1559899 |
Gene Length | 243 bp |
Protein Length | 80 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641672282 |
Product | protein of unknown function DUF37 |
Protein accession | YP_001798451 |
Protein GI | 171464338 |
COG category | [S] Function unknown |
COG ID | [COG0759] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0219614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.264154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGTTT TAAATAATGC GGCAATTAAG TTGATAAAAA TTTATCAACT AGCGTTAAGC CCATATTTTG GAATGCACTG TAAATACGTA CCTAGTTGTT CGCAATATGC TTGTGAATGC TTTAGTTATT ACGGATTTAT AAAAGGCTTT GGCCTAATGG TGTGGCGCAT TTTGCGTTGT AACCCGTGGT CACGTGGCGG CTATGATCCA GCCGCAAAAG ATACAAAACA TCAACTTGAG TGA
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Protein sequence | MRVLNNAAIK LIKIYQLALS PYFGMHCKYV PSCSQYACEC FSYYGFIKGF GLMVWRILRC NPWSRGGYDP AAKDTKHQLE
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