| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1726 |
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| Symbol | |
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| ID | 6184594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1509930 |
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| End bp | 1511183 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641672229 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001798399 |
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| Protein GI | 171464286 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00901] AmpG-related permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.299438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCC TTGGCTTCTC TGCGGGCTTG CCTTTGTTGC TGATATTGGG GACTCTAAGT
TTCTGGTTGC GTGAAGCGGG TATTGATCGC AGCACTATCG GGCACCTAAC TTGGGTTGGG
TTGATTTATG CCTTTAAGTG GGTGTGGGCG CCGCTGGTAG ACCATTTGCA AATACCCTTA
TTAACGATGC TATTTGGGCG CCGTCGTAGT TGGCTGCTCT TTGCGCAAGG GCTCATCATT
TTGGGTCTAG TTGGTATGTC GACCTTGGAT CCAAAGCTGG CACTCAATTC GATTGTGTGG
TGCGCCTTGT TGGTGGCCTT TGGTTCTGCC ACTCAAGACA TTGCTTTAGA TGCATTTCGT
ATTGAATCAG CCAATAGCGA CCATCAAGCA GCTTTGGCTG CCACGTATCA AACTGGATAT
AGGCTCGCCT TAATTTGGGC CGGCGCAGGT GTTCTTTGGC TTGCTGCTCG TGCTGAAACG
GGTAGTGGGT ATGATGCTAC TGCATGGCAA TTTGCCTATC TCTGTATGGC TGCCTCTATT
AGCGTTGGCG TGATAACAAC CTTGCTAAGC AAGGAGCCAA TCAAATACGA ATTGGCAAAA
GTACGGACTG CAAAAGCATG GCTCTATCAA ACTTTAGTCG AGCCTTTTGC AGAATTCATT
ACTCGCTATC GCTGGCACGC AGTTCTGATA CTGTCTCTGA TTGCCGTCTA CCGCATTAGC
GATGTCGTGA TGGGCATCAT GGCAAACCCG TTTTATGTAG ATATGGGCTA TACCAAGGAT
GAAGTGGCGG CGGTTAGCAA AGTATTCGGT GTGGTGATGA CCTTAGTGGG GGCCTTTGTT
GGTGGTGTGC TAACCCTACG CTTTGGCGTG CTCCGCATTT TATTTGTGGG CGCAATTCTC
TCAGCGGTAA GTAATTTATT GTTTGTGTGG CTGGCTACGC AGGGCCATGA TTTACATGGT
TTGATCTGGG TGATCTCTGC GGATAACTTA AGCTCAGGCA TTGCCAGTGC GGCGTTCATT
GCCTTCTTGT CATCGCTAAC TAATATCCGT TATTCAGCCA CTCAGTACGC TTTATTTAGC
TCCATGACGC TGCTTCTGCC GAAGTGGTTG GCAGGCTTTT CCGGAGTCTT TGTCGATAAC
TTTGGGTACC AAGCCTTCTT TTGTGGTACT GCCGTGATTG GGGCTCCGGT CTTGCTCTTA
ATTTGGGCGA CGGTTCATTT CAAGATTGTT CAGATCAAAA AAGAAGGGGA GTAG
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| Protein sequence | MLFLGFSAGL PLLLILGTLS FWLREAGIDR STIGHLTWVG LIYAFKWVWA PLVDHLQIPL
LTMLFGRRRS WLLFAQGLII LGLVGMSTLD PKLALNSIVW CALLVAFGSA TQDIALDAFR
IESANSDHQA ALAATYQTGY RLALIWAGAG VLWLAARAET GSGYDATAWQ FAYLCMAASI
SVGVITTLLS KEPIKYELAK VRTAKAWLYQ TLVEPFAEFI TRYRWHAVLI LSLIAVYRIS
DVVMGIMANP FYVDMGYTKD EVAAVSKVFG VVMTLVGAFV GGVLTLRFGV LRILFVGAIL
SAVSNLLFVW LATQGHDLHG LIWVISADNL SSGIASAAFI AFLSSLTNIR YSATQYALFS
SMTLLLPKWL AGFSGVFVDN FGYQAFFCGT AVIGAPVLLL IWATVHFKIV QIKKEGE
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