| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1711 |
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| Symbol | |
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| ID | 6182964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1495916 |
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| End bp | 1497103 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672214 |
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| Product | protein of unknown function DUF185 |
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| Protein accession | YP_001798384 |
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| Protein GI | 171464271 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1565] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.676361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA CCTTGACCAG CCTTGAAACG GAGCATAGTG CCCTTCTAAA GGCCAAAATA
GCCTCCCAGA TCGCTTCTCA AGGCGGCTGG CTCCCGTTTT CTCGCTATAT GGAGATGGCC
CTTTATGAGC CCGGTATGGG CTATTACAGC GCTGGAGCCC ACAAACTGGG GGCTGGCGGC
GACTTCACCA CCGCCCCAGA ATTAAGCCCC CTTTTTGGGG CCACTATTTG CTCAACGCTC
TTGCCGGTAC TTGAGGGGCT CAAGGAAAAA GGGCTGTCTA CCCAAATTTT AGAATTTGGC
GCAGGCACTG GAAAACTTGC CACATCCATT CTGACTCGCC TCAATGATCT TGGGTTTGTC
TTAGATCGCT ACGACATTAT TGAAATTTCA CCAGATCTAG CTCAGCGTCA ACAAGAAAAA
ATTAAAAATA CTGTAGAGCA ACTGAATCTC AAAACTCAAT GCAATTGGCT TACTGAACTG
CCTAAAAATT TTAATGGCGT CATTCTTGCC AATGAAGTAA TCGATGCCAT TCCCTGTGAT
GTCGTCATTT TTAAAAATGG GTTTTGGTAT TGGCATGGAG TTGCCATCGA GAATGACAAT
CTCACTTGGA AAGCAGGCTC TCCCGTCGAA CAGAAGTTAC TGCCACAAAG TCTTCTCAGC
AGCAATTTTT CAGAAGGCTA TGTCACTGAA CTACACACGC CAGCAAATGC ATGGATGCAA
CAAGTTGCCA AACATTTAGA CGCTGGCTTG TTTCTCACTT TTGACTATGG CTTTCCGGAG
AACGAGTACT ACCACCCACA AAGACTTGAG GGCACCCTAA TGGCCCACCA TCGTCATCAT
GCGATACAAG ATCCATTTCA TTTCCCTGGT CTGTGTGATG TAACAACGCA CGTAGAGTGG
TCTCAAATTG CTCGCAGTAC ATTGACGGAA AATGTGGATG ATGTATATCT CACCAACCAA
GCCGCCTACT TGCTAGATGC CGGAATTGGT GACATCGCTT TAGAGATTGG CGATCCAAGC
GATCCAGAAA CTTTTTTACC AATCTCTAAC AGTTTGCAAA AACTATTATC TGAAGCGGAG
ATGGGTGAGC TATTTAAAGT CTTTACATTC TCTAAGAGCT TGGATAGCCT GCTACCAGGT
CACGTACTTG AAGATCTTCC AGGCCTTCGA GGCAGAAATA GGCTTTAG
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| Protein sequence | MDITLTSLET EHSALLKAKI ASQIASQGGW LPFSRYMEMA LYEPGMGYYS AGAHKLGAGG
DFTTAPELSP LFGATICSTL LPVLEGLKEK GLSTQILEFG AGTGKLATSI LTRLNDLGFV
LDRYDIIEIS PDLAQRQQEK IKNTVEQLNL KTQCNWLTEL PKNFNGVILA NEVIDAIPCD
VVIFKNGFWY WHGVAIENDN LTWKAGSPVE QKLLPQSLLS SNFSEGYVTE LHTPANAWMQ
QVAKHLDAGL FLTFDYGFPE NEYYHPQRLE GTLMAHHRHH AIQDPFHFPG LCDVTTHVEW
SQIARSTLTE NVDDVYLTNQ AAYLLDAGIG DIALEIGDPS DPETFLPISN SLQKLLSEAE
MGELFKVFTF SKSLDSLLPG HVLEDLPGLR GRNRL
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