Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1502 |
Symbol | |
ID | 6183834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1305001 |
End bp | 1305870 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641672032 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001798204 |
Protein GI | 171464091 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.829406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAA ATAACACTAC ACAAAATAAT AGCAACGCCC ACATTACTTT TATTGGTGGT GGCAATATGG GGCGCGCCCT AATTAGCGGC CTCCTTGCCA ATGGTTTTGA ACCCGATCAG ATCTCTGTTA TAGAGGCAAA TGCCACTACA GCCTTGAAAC TGTATGAAGA TTTTGGAGTG CAGGGTATTG GCGCGCTTGA GCAAATCGCT TTTGACTTCG CTAAAAATAA TGTGGTTGTC ATGGCAATCA AGCCACAAGA CTTTAATGTT GTGGCTAAGG GCTTAGCAGC AAAACTCAAG CATGCTACAG CACCTGGCCC ACTCATTCTA AGTATCGCTG CGGGCATTCG CTTAAAAGAC ATGAGTCGCT GGCTGGATCA CACACGCTGT GTTCGCGCCA TGCCAAATAC TCCAGCTTTG ATTGGCAAAG GCATCACCGG ACTCTTTGCA GATGCGGCGG TTGATCAAGC AGACCGCGCA CTAGCTGAAA CAATTTGTCA TGCAGTAGGT CAAGCAGTAT GGGTTTCTGA AGAGAAGTTG ATGGATGCAG TTACCGCTGT TTCAGGCAGC GGACCTGCCT ATGTCTTTGC GTTTCTTGAA GCGATGCAAT CTGCAGGGGA GAAGCTGGGT CTCGATGCAG CGACAGCGCG CAAGCTAGCT TATGCGACCC TAGAGGGTGC CACTCAATTG GCTCATAACT CGGATGAGCA TGCCGGTGTT TTACGCGAGA GAGTTACTTC TAAAGGCGGC ACCACTGCGG CCGCTTTAGA TGTGATGAGG CAACAGGGCT GGCATGAGAT TTTAGAAAAA GCGATTGACG CAGCAAGTCA ACGTGGAAAA GCCATGGGCG ACGAACTAGG TAAAACCTAG
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Protein sequence | MSTNNTTQNN SNAHITFIGG GNMGRALISG LLANGFEPDQ ISVIEANATT ALKLYEDFGV QGIGALEQIA FDFAKNNVVV MAIKPQDFNV VAKGLAAKLK HATAPGPLIL SIAAGIRLKD MSRWLDHTRC VRAMPNTPAL IGKGITGLFA DAAVDQADRA LAETICHAVG QAVWVSEEKL MDAVTAVSGS GPAYVFAFLE AMQSAGEKLG LDAATARKLA YATLEGATQL AHNSDEHAGV LRERVTSKGG TTAAALDVMR QQGWHEILEK AIDAASQRGK AMGDELGKT
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