Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1486 |
Symbol | hemH |
ID | 6183747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1285886 |
End bp | 1286980 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641672020 |
Product | ferrochelatase |
Protein accession | YP_001798192 |
Protein GI | 171464079 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
TIGRFAM ID | [TIGR00109] ferrochelatase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCCCA ACCCGCATCT TCGCGCTTCC AAAACTGCAG TCTTACTGTT GAACTTGGGA ACGCCATCGG CACCAACCCC AAAAGCAGTA CGTGCTTACT TAAAAGAATT TCTTTCTGAT CGACGCGTAG TAGAAATTCC ACGAATTATT TGGTGGTGCA TTTTGAATGG CATTATTTTG TCAATTCGCA GCAGCGCTTC TGCAAAAAAA TATGCTTCTA TTTGGTTGCC AAAATTAGGC TCTCCTTTAA TGCATTACTC ACGCCTTCAG GCGAAAGAGC TTGGCGAAAT ATTTGCCAAT GAGGGGCATA CGGTCTTGGT GGATTTGGCA ATGCGCTATG GACAACCTTC TACCCAGTCT GTCCTAGAGG GCCTTAAGGC ACAAGGGATG GAGCGTTTGT TGTTGCTGCC TTTGTACCCC CAATATTCAG CAACCACGAC GGCATCCAGC TTTGATGAAG TTTTTCGTGT TTTAAGTACC TGGCGTGATC AGCCGGAATT ACGTTTGGTT AAGCACTATC ACGATAGTCC TGCTTATATT TCTGCGCTAC GTGATCAAGT GTTAAGTAGC TGGGATGCAA ATGGGCGACC TGATTTTGCT AAAGGCGATC GCTTTGTGAT GTCGTTTCAT GGATTGCCAA AACGCAATTT GATGAAGGGT GACCCATACC ATTGTGAGTG CTTAAAAACA GGCCGCTTGC TGGGTGAGTC TTTAGGTTTA GAGCCGGGTC AGTATATTGT GGCCTTCCAG TCGCGCTTTG GTAAGTCAGA GTGGTTAAAG CCTTATACAG CCCCAACAAT TGAAAAGCTG GCTAAAGAAG GTTGTCAATG GTTGGACATT TTTTGCCCAG GCTTTCCAGC GGATTGCTTG GAAACGCTCG AAGAGATTGC CATGGAAGCA CGTGAAATTT TCTTAGAGCA CGGTGGCAAG GATTATCGTT ATATCCCCTG CTTAGACAGC AACCCTAGGT GGATTGAGGC TTTAAGGGAT ATCGCCCACC ATCATTTGCA AGGCTGGCCT CTGGGGGTAG AGCCCCAGGC CGAATTGGCT AAGCGCGCCG AAAGGGCTGA GCTCGTTGAG AAAGCAAAGT ATTGA
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Protein sequence | MNPNPHLRAS KTAVLLLNLG TPSAPTPKAV RAYLKEFLSD RRVVEIPRII WWCILNGIIL SIRSSASAKK YASIWLPKLG SPLMHYSRLQ AKELGEIFAN EGHTVLVDLA MRYGQPSTQS VLEGLKAQGM ERLLLLPLYP QYSATTTASS FDEVFRVLST WRDQPELRLV KHYHDSPAYI SALRDQVLSS WDANGRPDFA KGDRFVMSFH GLPKRNLMKG DPYHCECLKT GRLLGESLGL EPGQYIVAFQ SRFGKSEWLK PYTAPTIEKL AKEGCQWLDI FCPGFPADCL ETLEEIAMEA REIFLEHGGK DYRYIPCLDS NPRWIEALRD IAHHHLQGWP LGVEPQAELA KRAERAELVE KAKY
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