Gene Pnec_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1387 
Symbol 
ID6183493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1192600 
End bp1193028 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content42% 
IMG OID641671932 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001798105 
Protein GI171463992 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAA TGAACTTTTT ACCAACCCTA AGAAGCTTAA TTTCTGCGTA TCAATCATTT 
GAGCGATATT CGGCGCCAGA CGTTAAGGCG ATGGGATTGA CTACCACTCA GTTTGACGTG
ATTGCCACCT TGGGTAATCA GCCACCTATG ACCTGCAAGG AGTTGGGTGA AAAAACTTTG
GTTACAAAAG GTACTCTTAC GGGCGTGCTT GAGCGTCTTG AGGCAAAAGG AATTCTAGAG
CGCAAGTTAA ATCCAGAAGA TGCTCGCAGC CAAATGATCA GCCTTACTCT TGACGGGCAG
GCATTGTTTG AAAAAGTATT TCCCGCCCAT CTTCGTCACT TAGAAAAAGC ATTTTCAAAA
TTGTCTGATA AAGAATTGAC GGAAGTGACT AAGTCGTTGC AGGCCATCAA CACTATTTTT
TCAAATTAA
 
Protein sequence
MTKMNFLPTL RSLISAYQSF ERYSAPDVKA MGLTTTQFDV IATLGNQPPM TCKELGEKTL 
VTKGTLTGVL ERLEAKGILE RKLNPEDARS QMISLTLDGQ ALFEKVFPAH LRHLEKAFSK
LSDKELTEVT KSLQAINTIF SN