Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1380 |
Symbol | |
ID | 6183756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1189192 |
End bp | 1189380 |
Gene Length | 189 bp |
Protein Length | 62 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641671927 |
Product | heme exporter protein CcmD |
Protein accession | YP_001798100 |
Protein GI | 171463987 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAATA GTCCTTCTGA TTTTTTTGCT ATGGGCGGTT ATGCGCTCTA TGTGTGGGCC AGTTTCGGTA TTTGTGCGCT GGTATTGGTA TTAGAGCCTT TATTTGTACG TGCCCGTTTT AGAGCAATCG TGCGCAGGTT AAAGCAAGAG CAATTAGCAG AACAGTTTGA TAAAGAGATT GGTAAGTGA
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Protein sequence | MWNSPSDFFA MGGYALYVWA SFGICALVLV LEPLFVRARF RAIVRRLKQE QLAEQFDKEI GK
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