| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1356 |
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| Symbol | |
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| ID | 6183164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1169935 |
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| End bp | 1170705 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671908 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_001798081 |
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| Protein GI | 171463968 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0588975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACA AGCCTACCGA TACCCCAACC AGCAAATGCT CAGTTTGCGT ACTGGGCCAG
TTTTGTTTGC CAGTTGGTCT AAGCAGTAGC GAAGTGTCAA AAATTGACAC CCTAGTTAAA
GAACGCGTCC ACCTGCAAAA AGGGGGAAAC CTGTATCGCC ATGGCGATCA ACTGAACTCT
GTATACAGCG TGCGCTTTGG CACCCTTAAA ACCGAATTTT GTCTGCAAGA TGGGCGACAA
CAAGTTATTG GCTTTCACCT TCCTGGTGAG ATCTTGGGTC TAGATGGCAT CGGTGAAGGT
CATTATCAAT CTGATGCAAT TGCTCTCGAA GAGAGTGAGG TCTGCATTAT TCGCTATGAA
GCCTTTGAAG ATTTAGCACG TCAAATTCCA ATGCTTCAGA ATCAGTTTCA TAAGATCATG
AGTCGCGAAT TGACTCATGA TCAACGCCAT TTACTTTCTC TTGGTACGAT GCGTGCCGAA
GAAAGATTGG CGGCATTTTT ATTGAGCCTC TCCCAACGTT TAGCTGCGCG CGGCTATCTC
AATAATGAAT TTGATTTACG CATGAGTCGC AATGACATTG GCAGTTATCT TGGCATCCAA
ATTGAAACCG TTAGTCGAAT GCTCTCGCGC TTTGCTGAAT CAGGCCTGAT TCAAATTAAA
CAGCGCCATA TTAAGCTCAT TGATATGAAT GGCTTGTACG AGCTAGCAGG CATTCCAAAT
CCTGACCGCC AGGGCTGCGC AAGCCCGGAC GTTCCTATCA ATCAGGCTTA A
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| Protein sequence | MNYKPTDTPT SKCSVCVLGQ FCLPVGLSSS EVSKIDTLVK ERVHLQKGGN LYRHGDQLNS
VYSVRFGTLK TEFCLQDGRQ QVIGFHLPGE ILGLDGIGEG HYQSDAIALE ESEVCIIRYE
AFEDLARQIP MLQNQFHKIM SRELTHDQRH LLSLGTMRAE ERLAAFLLSL SQRLAARGYL
NNEFDLRMSR NDIGSYLGIQ IETVSRMLSR FAESGLIQIK QRHIKLIDMN GLYELAGIPN
PDRQGCASPD VPINQA
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