Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1218 |
Symbol | |
ID | 6183750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1052517 |
End bp | 1052870 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641671799 |
Product | formyl-coenzyme A transferase |
Protein accession | YP_001797975 |
Protein GI | 171463862 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.437775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAC CATTAGACGG TATTCGTATT ATTGACTTCA CACACGTACA AGCAGGTCCT GCATGTACTC AGCTGTTGGC CTGGTATGGT GCTGACGTGA TTAAAGTAGA GCGCCCAGGC GCTGGCGACG TAACCCGCAG CCAATTGCGC GATATTCCAG GTGCAGATGC TTTGTACTTC ACGATGTTGA ATGGTAATAA GCGTTCTTTG ACTTTGGATA CCAAGACTGC CGAAGGTAAA GAAGTTTTAG AGAAGATGAT CAAGACTTCA GATGTCATGG TTGAGAACTT TGGTCCAGGC GCCTTGGATC GTATGGGATT CTCATGGAGG CGTATTCAAG AATTGAATCC ATAA
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Protein sequence | MTKPLDGIRI IDFTHVQAGP ACTQLLAWYG ADVIKVERPG AGDVTRSQLR DIPGADALYF TMLNGNKRSL TLDTKTAEGK EVLEKMIKTS DVMVENFGPG ALDRMGFSWR RIQELNP
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