| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1209 |
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| Symbol | |
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| ID | 6183410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1046778 |
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| End bp | 1048448 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671790 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001797966 |
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| Protein GI | 171463853 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000377158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT CACAACGCCG CCTTCTTGTT ACCTCAGCCC TACCGTATGC CAATGGACAG
ATTCATATTG GACATTTGGT GGAGTATGTA CAGACCGATA TTTGGGTTCG CTTTCAAAGG
ATGTGCGGCC ATGAAGTGCA CTATGTTGGC GCCGATGACA CCCACGGCAC CCCCATCATG
CTACGCGCCG AAAAAGAAAA CCTTACTCCG AAAGAATTGA TCGCCAATGT TTGGAAAGAG
CATAAGCGTG ACTTTGATAA CTTCCTCATT TCATTTGACA ACTACTACAC CACCGATAGC
CCAGAAAATG AAAAGTTAGC GCAAAGCATT TATCTCAAGC TACGTGATGC GGGTTTGATA
GAAAAGCGCG CAATTGAACA AGCTTACGAT CCCGTGAAAG AAATGTTTTT ACCGGATCGC
TTTATCAAAG GTGAATGCCC TAAGTGCGGC GCCAAAGATC AATATGGTGA TAACTGCGAA
AAATGTGGCG CAACCTACTC GCCCACCGAT CTCAAGAATC CATTTTCGGT GGTAAGCGGC
GCAACACCAA TCAAAAAAGT TTCCGATCAT TACTTCTTCA AGTTATCAGA TCCACGCTGC
GAAGAATTTT TACGCGATTG GACTCAAGTA AAAACGCCTT TGCAGCCAGA GGCTCGCAAT
AAGATGAAGG AATGGGTCGG ACAGCCTGGA GAAAGCAAAC TGGGGGATTG GGATATCTCC
CGCGATGCCC CGTATTTCGG CTTTGAGATC CCTGATGCAC CAGGTAAGTA CTTCTATGTC
TGGCTTGATG CTCCTATTGG CTACTACGCT AGCTTTCTCA ATTATTGCCA GACAAAGGGC
CTTAATTTTG ATGAGTGGGT AAAGCCAGAT ACCACTACTG AGCAATACCA CTTCATCGGC
AAAGACATTT TGTATTTCCA TGCTTTGTTT TGGCCGGCTA CCTTGAAATT TGCAGGCTAT
CGCACACCGA CCAATGTTTT TGCCCACGGC TTCTTAACTG TTGATGGCGA GAAAATGAGC
AAGTCACGCG GCACATTGAT TTCCGCAAAC AGCGTGATTG AATGCGGCTT TAATCCTGAG
TGGTTCCGCT ATTACTTTGC AACCAAGCTT AACGACAGCA TGGAAGATTT AGATTTAAAT
CTTCAAGATT TCGTTGCACG TGTTAACAGT GACTTATTAG GCAAGTACAT CAATATTGCT
AGTCGTAGCG CAGGCTTCTT AGTTAAGCGT TTTGGCGGCG TTGTTTCCGA TGAGGCAATG
AACAACCCGT TACTCAAAGA AATTGCTGCT GCAAGCGAAA AGATTGCTGA ACTCTATGAG
GGACGCGAAT ATGCCAAAGC ACTACGCACG GTGATGGAGC TTGCAGATAA AGTGAATGGC
TTTGTGGATG AGAACAAGCC ATGGGAAATC GCCAAAGATC CAGAACGTGA AGCTAATTTG
CAACGCGTTT GCAGCATTAC ACTGGAAGCA TTCAGAATGC TGAGTCTTTA TCTCAAGCCA
GTTATTCCCC AAGTTGTCGC TAGCGTAGAG GAATTCCTCT CATTGCCGCC ACTTTCTTGG
GCGAACATTA ATATCCCGCT CTCTAGCAAG AACCCCCTCA AGGCCTACAA GCACCTGATG
ACCCGAGTTG AGGCCCCACA AATTGAGGCT TTGCTGGCTG CAAACTTGTA A
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| Protein sequence | MSNSQRRLLV TSALPYANGQ IHIGHLVEYV QTDIWVRFQR MCGHEVHYVG ADDTHGTPIM
LRAEKENLTP KELIANVWKE HKRDFDNFLI SFDNYYTTDS PENEKLAQSI YLKLRDAGLI
EKRAIEQAYD PVKEMFLPDR FIKGECPKCG AKDQYGDNCE KCGATYSPTD LKNPFSVVSG
ATPIKKVSDH YFFKLSDPRC EEFLRDWTQV KTPLQPEARN KMKEWVGQPG ESKLGDWDIS
RDAPYFGFEI PDAPGKYFYV WLDAPIGYYA SFLNYCQTKG LNFDEWVKPD TTTEQYHFIG
KDILYFHALF WPATLKFAGY RTPTNVFAHG FLTVDGEKMS KSRGTLISAN SVIECGFNPE
WFRYYFATKL NDSMEDLDLN LQDFVARVNS DLLGKYINIA SRSAGFLVKR FGGVVSDEAM
NNPLLKEIAA ASEKIAELYE GREYAKALRT VMELADKVNG FVDENKPWEI AKDPEREANL
QRVCSITLEA FRMLSLYLKP VIPQVVASVE EFLSLPPLSW ANINIPLSSK NPLKAYKHLM
TRVEAPQIEA LLAANL
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