Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0866 |
Symbol | |
ID | 6184121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 744196 |
End bp | 744579 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641671492 |
Product | membrane protein-like protein |
Protein accession | YP_001797679 |
Protein GI | 171463566 |
COG category | [S] Function unknown |
COG ID | [COG3308] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.060146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.425014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAA AGATTCTCGA TAAAAACCCC TGCCAGCTAA TTGCTACCGC AGCTTTTGTT GATTTATTTA TTCTTTGCGT CTCTTGGGAA TGGTTTATTT CCCCGCTGCG ACCAGGAGGC TCCTGGTTGA TTCTGAAAGG TGTGCCTCTG CTATTTGCAA TTCCGGGTCT ATGGAAAGGC AAGGTTTACA CCATGCAATG GGCGTCAATG CTAATCTTGC TCTACGTCAC CGAAGGCTTG GTACGTATCT TAGAAACGGG TGCTAACTTT TGGCTTGCCA CACTTGAAAC TTTGCTTGCT ACAGTTGATT TCGTTTGCTT ACTCATTTAT TTAAAGCCTA TTAAACAAAA GGCTAAAGCA CTTAAAAAGC TCTCAACAAA GTAG
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Protein sequence | MIKKILDKNP CQLIATAAFV DLFILCVSWE WFISPLRPGG SWLILKGVPL LFAIPGLWKG KVYTMQWASM LILLYVTEGL VRILETGANF WLATLETLLA TVDFVCLLIY LKPIKQKAKA LKKLSTK
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