Gene Pnec_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0866 
Symbol 
ID6184121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp744196 
End bp744579 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content42% 
IMG OID641671492 
Productmembrane protein-like protein 
Protein accessionYP_001797679 
Protein GI171463566 
COG category[S] Function unknown 
COG ID[COG3308] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.060146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.425014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA AGATTCTCGA TAAAAACCCC TGCCAGCTAA TTGCTACCGC AGCTTTTGTT 
GATTTATTTA TTCTTTGCGT CTCTTGGGAA TGGTTTATTT CCCCGCTGCG ACCAGGAGGC
TCCTGGTTGA TTCTGAAAGG TGTGCCTCTG CTATTTGCAA TTCCGGGTCT ATGGAAAGGC
AAGGTTTACA CCATGCAATG GGCGTCAATG CTAATCTTGC TCTACGTCAC CGAAGGCTTG
GTACGTATCT TAGAAACGGG TGCTAACTTT TGGCTTGCCA CACTTGAAAC TTTGCTTGCT
ACAGTTGATT TCGTTTGCTT ACTCATTTAT TTAAAGCCTA TTAAACAAAA GGCTAAAGCA
CTTAAAAAGC TCTCAACAAA GTAG
 
Protein sequence
MIKKILDKNP CQLIATAAFV DLFILCVSWE WFISPLRPGG SWLILKGVPL LFAIPGLWKG 
KVYTMQWASM LILLYVTEGL VRILETGANF WLATLETLLA TVDFVCLLIY LKPIKQKAKA
LKKLSTK