Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0819 |
Symbol | tpiA |
ID | 6182879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 705191 |
End bp | 705949 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641671447 |
Product | triosephosphate isomerase |
Protein accession | YP_001797637 |
Protein GI | 171463524 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACCAC TCATCGTAAT CGGCAACTGG AAAATGAACG GCAGTCTTGC AAATAATCAA GACTGGGTTA AGACTGTTGC TCGCGGCATG GAGAGTGGTA TGCCATCTGG TCGTAAATAT GCAGTTTGCC CTCCTTTTCC ATACTTGCAA CAATGTGCTG ACTTAATTAA AGGACATTCG TTGGCGTTCT TAAGTTTGGG TGCTCAGGAT GCTTCGGCCT ATGGCTCTGG GGTCTACACC GGAGAGGTGG CAGCAGCAAT GCTGAAGGAG TTTGGCTGCA CTTGCGTCAT CGTAGGCCAT TCAGAGCGCC GTCAAATGCA TCAAGAAGTT GATGAGGTGA TTGCGTCTAA AGCGCTTCAA GTTTTGGACA ATAGCATGAC ACCAGTAATT TGTGTTGGTG AAACGGCTGA TGAGAGGAAT TCTGGTAGAG CCCAAGAGAT TGTTTGCTCT CAGGTTGCAA AGCAAGTAGG CGTTTTGCAG GATCGTCTGG TTGACTGCCT AATTGCCTAT GAGCCTGTAT GGGCGATAGG CACCGGTAAA GTGGCTAGCG CTCAAGTTGC ACAAGACATG CATCGCGCTA TTCGCTTGCA ATTGGCTGAA TTTAATGAGG ACGTAGCGTC TCATGTAGGA ATTTTGTATG GCGGCAGTGT CAAACCTGAT AATGCCGTTG AATTGTTTGC CATGCCTGAT ATTGATGGCG GATTGGTTGG GGGTGCTTCA CTGAGTCCTC AAGACTTTCT AGCCATCTGC AAGGCATAG
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Protein sequence | MRPLIVIGNW KMNGSLANNQ DWVKTVARGM ESGMPSGRKY AVCPPFPYLQ QCADLIKGHS LAFLSLGAQD ASAYGSGVYT GEVAAAMLKE FGCTCVIVGH SERRQMHQEV DEVIASKALQ VLDNSMTPVI CVGETADERN SGRAQEIVCS QVAKQVGVLQ DRLVDCLIAY EPVWAIGTGK VASAQVAQDM HRAIRLQLAE FNEDVASHVG ILYGGSVKPD NAVELFAMPD IDGGLVGGAS LSPQDFLAIC KA
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