| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0715 |
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| Symbol | |
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| ID | 6183822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 622087 |
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| End bp | 622980 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641671361 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001797556 |
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| Protein GI | 171463443 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.731996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATC TCAACCAAAA ACTTAACCGA ATCCTCGTAA TTGACGATAA CCTGGCAATT
TATGAGGATT TTTGCAAGGT GCTCTGCCCA AGTACTACAC CAGCCAAAGA GTTGGTTGAT
TTGGCAGCAT CCATCTTTGG CGGAGAGCAA CAAAAGGTTG CCTCCATGGA TCATCAGATT
GACTTTGCCT TAAGAGGCCA AGATGGCGTG GAGAAGGTCA GAGCTGCAAT TAATGAGGGT
TGGCCTTATG TCATCGCATT TGTCGATATG CGCATGCCTA ATGGGTGGGG TGGGCTAGAA
ACGATCAAAA ATCTGTGGAT TGCAGACTCG CAACTACAAA TTGTTCTCTG CACCGCTTAC
TCAGATTACT CTTGGGATGA GATACGCGCC CAATTAACCA AACGTGATCG ATTTTTAATA
CTGAAAAAGC CCTTTGACAA TATTGAAGTA CAGCAAATGG TTGAAACTTT GGTTAACTGC
CAAGAAGCCG AAAATCAATT AAGACTTTTG GAGGTCTGTG TTTCGCAGGC CGATGGTGTT
GTCATCGTTA CCGATGTTCG CCCCAAAACC GATGGAGGGT CAGAATTTTG GGTAGATCTC
AACATGTCAC CCATTGAAGA TCGTAAGGGG CAAGTAAGCC ATTGGCTTTG CTTACAGCGC
GATATTAATC AAAAAACTAC CCTAGATTCA CTCACCGAAA AAGAATTTAG CGTTGTCAAA
ACAGTTGCTA GCAATAGCGA AATTACTCTC CGGGAAATTG CCGACAAGCT CCATATCAGC
GAACATACCA TAAGAAATTA TTTAGCTTCT ATCTACGAAA AGCTTGGGTT GCGCAGCAGA
TTAGAGCCCT ATATTTTCTG CTGCAAGTTC ATGGGTGAAA TAAAAGGCAA CTAG
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| Protein sequence | MPNLNQKLNR ILVIDDNLAI YEDFCKVLCP STTPAKELVD LAASIFGGEQ QKVASMDHQI
DFALRGQDGV EKVRAAINEG WPYVIAFVDM RMPNGWGGLE TIKNLWIADS QLQIVLCTAY
SDYSWDEIRA QLTKRDRFLI LKKPFDNIEV QQMVETLVNC QEAENQLRLL EVCVSQADGV
VIVTDVRPKT DGGSEFWVDL NMSPIEDRKG QVSHWLCLQR DINQKTTLDS LTEKEFSVVK
TVASNSEITL REIADKLHIS EHTIRNYLAS IYEKLGLRSR LEPYIFCCKF MGEIKGN
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