| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0314 |
|---|
| Symbol | |
|---|
| ID | 6184319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 281144 |
|---|
| End bp | 281659 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641671022 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_001797221 |
|---|
| Protein GI | 171463108 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCCA TCTTACTATC CGCTAGCTGG CCCATTTGGC CCCTTTTAAT TATCTCCATT
TTGGGTATGG CTATTGCCTT AGAGCGCTTC TGGTATCTCC GCCAAATCCA TATGTTTCCC
AAAAACTGTC TTGAAACTGC TTTTTCGCTG GCCAATCAGA TACAAAACTC AAGTACTGTT
GTCAGCGATC TGCAGGTGGC TGATTTGACT CAAATATCGC CAGCAAGCCC ATTACTCGCC
TGCGCCCTCA AAGAGAAGTT GGTAGGCAGT AGCGCCGAAG TCGCCTTAGA AGGGTTGCAA
GCAAGTGCGC AAACAATCTG GCTCAAGTTA GATCGCTATC TTGGCGCCCT AGCTACGATT
GCCACGATCG CACCATTGCT CGGTTTATTT GGCACAGTAG TAGGCATGAT TGAAATCTTT
GGCAGTCAGG GTGCAATTAA TGGCGCTGCA GGCAGCCCAC AACAATTGGC GCACGGAATT
CAGTTGCTCT GTATAACACT GCATTTGGCT TGTTAA
|
|---|
| Protein sequence | MYSILLSASW PIWPLLIISI LGMAIALERF WYLRQIHMFP KNCLETAFSL ANQIQNSSTV
VSDLQVADLT QISPASPLLA CALKEKLVGS SAEVALEGLQ ASAQTIWLKL DRYLGALATI
ATIAPLLGLF GTVVGMIEIF GSQGAINGAA GSPQQLAHGI QLLCITLHLA C
|
|---|
| |