| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0304 |
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| Symbol | |
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| ID | 6184430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 273775 |
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| End bp | 274602 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671012 |
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| Product | protein TolA |
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| Protein accession | YP_001797211 |
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| Protein GI | 171463098 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.28757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAGCG CCCCTACTTT TCAATCCCCC TTCTCGCCAT TCAAGCGAGG ACGTTATACA
AAACAAGAAA GCACTAAACG CGCATTTACT TTTTCATTAA TCGCGCATCT AGGATTACTC
GCTTTTTTAA TGATCGGAAT CAGTTGGAAC AACAGCACTT CATCTGGAGT TGAAGTAGAA
CCCTGGGACT CTGCTCCACA AGTTGAAACG CCGCCTAAGC CAGAACGCAA AACGGAAATG
AAAGAAGAAG TAGCTGACAT TGCGATCAAG AAAAAGAAAG TTGAGAAAGA GCCTCCTAAA
AAAGAAGTGA AAGAAACACC TAAAGCAGCA AAGCCTCTTC CACCAAAAGA GAAGGCGAAA
GAAAAAGAAC CAGAGAAGCC GAAAAAAGCT GAAGCACCGA AGAAGGCAGA GGCAAAATCT
CCCGCTGAAA CTAAAGCGAA TGCTGCAGCT GAAAAAGCAC GCGCTGATCA GCTCGCGCGT
TTGCGTGCAG CGGCTGGCGC TGAGGGCGGT AGCGGCGGCA CTGCAGGAAG TGGCGTTGGG
GGTGGCGGCA ATACACCCCC AGGGTGGACA GACAAAGTGA TTAAAAAGGT CAAACCATTG
ATCGTATTTA ACCCAGAATC TGTAAGCGGC AACCTAGCCG CCGTGGTTTT GGTAAATCTT
GCTCCCGATG GGGCTATTTT GAGCACCAAA ATGCTGAGCT CTAGCGGCAA TGCTGGATAT
GATCGTGCTG TGCTACTTGC TTTAACCCGC GCAGAAAGTC TGCCAAAAGA CGACAATGGC
AAAATTCCAC AACGCGAAGT CAAACTGACC TTTAAACCCA AAGATTAA
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| Protein sequence | MNSAPTFQSP FSPFKRGRYT KQESTKRAFT FSLIAHLGLL AFLMIGISWN NSTSSGVEVE
PWDSAPQVET PPKPERKTEM KEEVADIAIK KKKVEKEPPK KEVKETPKAA KPLPPKEKAK
EKEPEKPKKA EAPKKAEAKS PAETKANAAA EKARADQLAR LRAAAGAEGG SGGTAGSGVG
GGGNTPPGWT DKVIKKVKPL IVFNPESVSG NLAAVVLVNL APDGAILSTK MLSSSGNAGY
DRAVLLALTR AESLPKDDNG KIPQREVKLT FKPKD
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