Gene Pnec_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0103 
Symbol 
ID6184325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp96016 
End bp96255 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content45% 
IMG OID641670837 
ProductBolA family protein 
Protein accessionYP_001797037 
Protein GI171462924 
COG category[K] Transcription 
COG ID[COG5007] Predicted transcriptional regulator, BolA superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0570804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACCCA CCCCTGAACA AATTGAAGGC TATATCAAAC AAGGTATTCA GTGCACCCAT 
ATACAAGTAG AGGGTGATGG CCAGCATTTT TTTGCCACTA TCGTGAGTCC TGAGTTTGAG
GGTAAGCGTT TAGTGCAGCG CCATCAATTA GTTTACGGCG CCATGGGTGA TCGCATGAAA
GCAGAAGTAC ATGCTTTATC AATCAAGGCA TTTACACCCG AAGAGTTTGC TCAGGATTAA
 
Protein sequence
MLPTPEQIEG YIKQGIQCTH IQVEGDGQHF FATIVSPEFE GKRLVQRHQL VYGAMGDRMK 
AEVHALSIKA FTPEEFAQD