Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0090 |
Symbol | |
ID | 6183314 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 84527 |
End bp | 86435 |
Gene Length | 1909 bp |
Protein Length | |
Translation table | |
GC content | 46% |
IMG OID | |
Product | |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.541776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.134423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCACA CCAAAGGCAA GAAATCTCAT GAGATCGTTT CTCAGGGATT AAGGATTCTT GAAAACTTAG ATCACCAGGG AGCGGTTGGT GCCGATCCTC TAATGGGTGA TGGTGCTGGC ATCTTGATTC AGATTCCAGA TACTTTGTAT CGCGAAGAAA TGGCCAAGCA AGGCGTGACC TTGCCGCCCT TAGGTGAATA CGGCGTAGGC ATGATCTTCT TGCCGAAGGA GCATGCATCT CGTTTGGCGT GTGAGCAAGA ATTAGAGCGT ACCGTTCGTT TGGAAGGTCA GGTTGTTTTG GGTTGGAGAG ATGCTCCGGT AGATGTGAAG TTGCCGATGT CTCCAACAGT GCAAATGACA GAGCCATTCA TTCGTCAAAT TTTTATTGGT CGTAGCCGCG ACATCATGAC AACAGACGCG CTCGAACGCA AGTTGTACGT GATTCGCAAG ACAGCAAGCC ATGCAATTCA AGATTTACAT TTGAAGCACG GTAAAGAATA TTTTGTTGCC TCAATGTCTG CTAGAACCAT TGTTTATAAA GGTTTGCTGT TAGCGAATCA AGTTGGTGCC TATTACCAAG ATTTGCAAGA CAAGCGTACT GTGTCAGCAC TTGCATTGGT GCATCAACGT TTCTCAACCA ATACTTTCCC TGCTTGGGAA TTGGCGCATC CGTATCGCAT GATTGCGACA ACGGTGAGAT CAATACCGTT AAAGGTAACG TCAATTGGGT CAATGCACGT GAAGGTGCAA TTAGCCCCCT GTGCTTGGTG ATGACTTACA AAAACTGTGG CCATTAATTT ATCCAGGTCA GTCAGACACT GCTTGTTTTG ATAACTGCTT AGAGTTGTTG GTGATGTCTG GTTATCCATT GGCTCAAGCC ATGATGATGA TTCCTGAGGC ATGGAAGCAG TATGCATTGA TGGATGACAA TCGCCGCGCA TTTTATGAAT ACCATGCAGT AATGATGGAG CCATGGGATG GCCCTGCAGC AATGGCATTT ACCGATGGCC GTCAAATTGG CGCAACCTTG GATCGCAATG GTTTACGTCC AGCACGTTAT TACGTGACTG ATGATGACCT CGTCATCATG GGTTCTGAGG CGGGTGTGTT GCCTATTCCT GAGAGCAAGA TCGTTCAAAA GTGGCGCTTA CAACTAGGCA AGATGTTCAT GATCGACATG GAGCAAGGTC GCATCATTGA TGACATTGAG CTCAAGAACG CGGTTTCTAA AGCTAAGCCA TATAAGAGTT GGATCGATGC GGTTCATGTG AAGTTGGACG AAGTCGATGC CAGCAAGGTT GACTTAGTTG ATGAGGAAAC CACCATTCGT CCAGCAGCTA AATTACTAGA TCGCCAACAG GCTTTTGGCT ACACCCAGGA AGATATTAAG TTCCTCATGG CTCCAATGGC TATGAATGGT GAAGAGGCGA TTGGTTCAGT GGGCAATGAC AGCCCATTAG CGGTTCTTTC AAATAAGAAC AAGCCGCTCT ATAACTACTT CAAGCAATTA TTTGCACAAG TTACCAACCC CCCAATCGAT CCGATTCGCG AGAACATGGT GATGTCTTTG GTTTCTTTCA TTGGCCCTAA GCCGAACTTG TTAGACACCA ACAATATCAA TCCTCCAATG CGCTTGGAAG TAAGCCAGCC AATTTTGGAC TTTGATGACA TCACTAAAAT TCGTCATATT GGCCATTACA CCAATGGCAA GTTCCGCTCA TATGAGTTGG ACATCTGCTA TCCAGCTTCA TGGGGTAAGG CTGGCATTGA GGCGCGCTTG GCATCATTGT GTGCTGAGGC TGCTGATGCC GTTCGATCTG GTTACAACAT TTTGATCGTG AGTGATCGCC AGGTTGATGA AAACCATGTG GCTATTCCAG CGTTGTTGGC AACTTCTGCA ATCCACTAG
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Protein sequence | |
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