Gene Pnec_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0071 
SymbolinfA 
ID6184080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp68491 
End bp68709 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content48% 
IMG OID641670813 
Producttranslation initiation factor IF-1 
Protein accessionYP_001797013 
Protein GI171462900 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.358943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.000000000845588 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAAAG ACGATGTAAT TCAGCTGGCG GGAGAAGTTG TAGAGAGTTT GCCGAACGCG 
ATGTTTCGCG TGAAGCTAGA AAACGGACAT GTGGTTCTAG GGCACATTTC AGGCAAAATA
CGGATGCATT ACATCCGTAT TTTGCCGGGA GACAAGGTGA CGGTAGAGAT GACTCCTTAC
GACCTGACGC GCGCCAGAAT CATTTTCCGT GCGAAGTAA
 
Protein sequence
MSKDDVIQLA GEVVESLPNA MFRVKLENGH VVLGHISGKI RMHYIRILPG DKVTVEMTPY 
DLTRARIIFR AK