Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0071 |
Symbol | infA |
ID | 6184080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 68491 |
End bp | 68709 |
Gene Length | 219 bp |
Protein Length | 72 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641670813 |
Product | translation initiation factor IF-1 |
Protein accession | YP_001797013 |
Protein GI | 171462900 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.358943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000000000845588 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAAAG ACGATGTAAT TCAGCTGGCG GGAGAAGTTG TAGAGAGTTT GCCGAACGCG ATGTTTCGCG TGAAGCTAGA AAACGGACAT GTGGTTCTAG GGCACATTTC AGGCAAAATA CGGATGCATT ACATCCGTAT TTTGCCGGGA GACAAGGTGA CGGTAGAGAT GACTCCTTAC GACCTGACGC GCGCCAGAAT CATTTTCCGT GCGAAGTAA
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Protein sequence | MSKDDVIQLA GEVVESLPNA MFRVKLENGH VVLGHISGKI RMHYIRILPG DKVTVEMTPY DLTRARIIFR AK
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