| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0019 |
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| Symbol | |
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| ID | 6184014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 18410 |
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| End bp | 18946 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670753 |
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| Product | ATP synthase F1, delta subunit |
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| Protein accession | YP_001796963 |
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| Protein GI | 171462850 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000168594 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.000447823 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTGATT TAGCCACTAT TGCACGTCCT TATGCGGAAG CGCTTTTTCA AAGCGCCAAG
CCAGCTGAGC TTGCTGGATG TTTGGAGCAA TTAAACGAAC TGGCACAGCT TGCTGCTTTG
CCAGAAGTTG CTGCTTTATC AAACAACCCA AAAGTATCCG CTGATGATTT AAGTAAGCTG
CTTTCCGGCA TGGTGAAAAC GAAGTTGGAC CCTAAGGTTG CTAGCTTTTT AAATCTTGTA
AATCAAAACC ACCGCTTGGT AGCCGTTCCC GAAATTGCTC ATCAATTCGA AGCAATGAAG
AATAAGAGCG AAGGCGCAGC AGAAGTAAAT ATTACTAGCG CATTCCCTTT AGAGGGTTCT
GCGTTAAACG ATTTGTTGTC AAGTTTGAAG AAGCGCTTTG GGGGTAAAGA ATTGCGCCCA
ACTATTCAAG TTGACCCAAC ATTGATTGGC GGAGTTCGTA TTCAAGTTGG CGATGAAGTA
ATGGATAGTT CAGTTAAGGT TCAGTTAGCT CAAATGCAAG CAAGTCTTGG CGCATAA
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| Protein sequence | MADLATIARP YAEALFQSAK PAELAGCLEQ LNELAQLAAL PEVAALSNNP KVSADDLSKL
LSGMVKTKLD PKVASFLNLV NQNHRLVAVP EIAHQFEAMK NKSEGAAEVN ITSAFPLEGS
ALNDLLSSLK KRFGGKELRP TIQVDPTLIG GVRIQVGDEV MDSSVKVQLA QMQASLGA
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