| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_5004 |
|---|
| Symbol | |
|---|
| ID | 4686046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008764 |
|---|
| Strand | - |
|---|
| Start bp | 89 |
|---|
| End bp | 922 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639826832 |
|---|
| Product | replication C family protein |
|---|
| Protein accession | YP_973994 |
|---|
| Protein GI | 121583583 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.594816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTA AACAAAATCT TGACCATATC CGGCACGAGC CAGGGCACGT ACTGGCGCCT
GGACTGTTTC GCAGCCTCAA AAAAGGTGAT TACAAACGGT TGAAGCTCGA TATTGCCTAT
GAATTCGGCA AGGGTGAGCG GCTTGAGTTC AAGGGGGCTG AACCCCTTGG AGTGCCCGAA
CTGCGCATTT TGCAAGGACT GATTGGCATG GCTGGACCCA ATGGCCTACT GCTGACGCCA
GAGCCGAAAA CCGAATCCGG CCAGCAATTG CGTTTGCTAC TGGAAACCAA ATTTGACGCG
ATCGAGACAA ACGCATTGGT GGTTAAAGGG TCTTACCGGG CGCTGGCCAA GACCATTGGC
TACGCAGATA TTGAAAACAC CAAAAACATT CAGGAATCAA TCGAACGTCT TTGGGGGGTA
TCTGTCATCG CACGAAAGGG CGGAAAACAC ATGGGGTTTC GCTTGCTTTC TGAATACGCG
TCCGACGACG CGGACGGCCG GTTGTATGTT GCACTGAATC CTGTGCTGGC CAGGGCGATC
TTGGGCGAGG CCCAGCATTG CAGGATCAGC CTGGACGAGG TAAGGGCCTT AAAGACCGAT
CCAGCGCGAT TGATGCATCA AAGACTCTGC GGCTGGATCG ACATAGGAAA GTCCGGCAAG
ACGACGATTG AGACGCTTTG CGGGTACATC TGGCTCGATG AAGCCACCCC AGAAGCCATG
AAAAAGCGCA AACAAGCAGT GAGGCGCGCA CTGAAAGAGA TGGAGGCTCT GGGCTGGAAA
GTGACGGAAT ATATCAATGG GAAATTCGAG ATTACACGAC CAGAAATCGG ATAA
|
|---|
| Protein sequence | MKPKQNLDHI RHEPGHVLAP GLFRSLKKGD YKRLKLDIAY EFGKGERLEF KGAEPLGVPE
LRILQGLIGM AGPNGLLLTP EPKTESGQQL RLLLETKFDA IETNALVVKG SYRALAKTIG
YADIENTKNI QESIERLWGV SVIARKGGKH MGFRLLSEYA SDDADGRLYV ALNPVLARAI
LGEAQHCRIS LDEVRALKTD PARLMHQRLC GWIDIGKSGK TTIETLCGYI WLDEATPEAM
KKRKQAVRRA LKEMEALGWK VTEYINGKFE ITRPEIG
|
|---|
| |