5 homologs were found in PanDaTox collection
for query gene Pnap_5004 on replicon NC_008764
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008764  Pnap_5004  replication C family protein  100 
 
 
277 aa  565  1e-160  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.594816  n/a   
 
 
-
 
NC_008740  Maqu_1723  replication C family protein  55.71 
 
 
302 aa  318  6e-86  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2541  plasmid and phage iteron-binding protein  53.14 
 
 
289 aa  298  8e-80  Acidovorax sp. JS42  Bacteria  normal  0.127088  hitchhiker  0.000246073 
 
 
-
 
NC_008463  PA14_15400  putative replication protein, RepC  52.77 
 
 
295 aa  296  2e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000000258356  unclonable  1.25814e-21 
 
 
-
 
NC_012912  Dd1591_4260  replication C family protein  43.84 
 
 
279 aa  238  9e-62  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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