| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4924 |
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| Symbol | |
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| ID | 4685774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008759 |
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| Strand | + |
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| Start bp | 111722 |
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| End bp | 114829 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826566 |
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| Product | hypothetical protein |
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| Protein accession | YP_973730 |
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| Protein GI | 121583294 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA TAGCCAACGT CCACACCGAA CGCGTCTTCG AAAACGAGCT TTGCGAGCAC
CTGGCCGCCA ACGGCTGGTC CGTGCGCACC CACCTGCAGG ATGCCAAGTC CTACAGCCGT
GAGCTGGCCC TCTTCCCCGA AGACCTGATT GCCTTCGTCC AGGAGACGCA GCCCAAGGAG
TGGGCCAAGT TCAAGCAGTG GCACAACGGC CAGTCCGAGG CGATGTTCAC CAAGCGTGTG
GCCGACCAGC TCAACAGGCA CGGCACCCTG CACCTGCTGC GCCACGGGTT CAAGGACTCG
GGCAGCAACG GAACCACCAA GTTCTTCCTG TGCCAGTTCC GCCCGGCGCA CAAGAAAAAC
ATGCAGCTGT GGGAGATGTA TGAGAAGAAC CGCCTGACGG CCATCCGCCA GTTGCACTAC
TCGCTGCACA ACGAAAAAAG CTTTGACATG GTGCTCTTCG TCAACGGCTT GCCGGTGGCC
ACCACAGAGC TCAAGACCGA CATGACGCAG TCCATCAAGG ACGCCATCGA CCAGTACAAG
AAGGACCGCC TGCCCCGCGA CCTCAAGTCC AAGGAGCTCG AACCCCTACT GCAGTTCAAG
ACCCGGGCCC TGGTGCACTT TGCGGTGTCG ACCGACGAGG TTTTCATGGC CACCAAGCTC
GAGGGCGACA AAACATATTT CCTGCCGTTC AACCTGGGCC GTCCGGACGG CTTTGGCGGC
GCTGGCGCTG GCAATCCCCC TGCGACCAAG GAACATGGCT ACCCGACTTG GTACCTGTGG
AAGCTGGTCT GGTCGCGCGA TGTCTGGCTC GACATCCTGG GGAACTTCCT GCACATCGAG
GTGAAGGAGG CGCAGGACAA GGCCGGCAAG AAAGTCACCA AGGAATCCTT GATTTTCCCG
CGCTTTCACC AGCTCGACGC CGTGCTGCAC CTGGTTCGCG GCGCCGGCGA CGAAGGGGTT
GGACAGGTCT ACCTGATTCA GCACTCTGCC GGCTCGGGCA AGTCCAACAC CATCGCCTGG
ACGGCGCACC GGCTCGCCAA CCTGCACAGC GCCCAAGATG ACAAGGTATT TGACACGGTC
ATCGTCATCA CGGACCGCCG GGTCCTGGAC CGCCAGCTGC AGGAAACGAT TTCGCAGTTC
GAGCACAAGG CCGGCGCCGT TCAAAAAATT GACCAGAACT CCGAGCAGCT GGCCAAGGCC
CTCAATGACG GCGTGCCGGT CATCATCACC ACGCTGCAAA AATTCCAGTT CATCCTGCAA
AAGGTCCAGG GCCTGAAGGA CAAGAAGTTC GCGCTCATCG TAGACGAGGC CCACTCCAGC
CAATCCGGGT CAGCCGCCCA GAAGCTACGC CGGGCTCTGA CGACGGACAC CAAGAAGGTA
GTGACCGTTG AGCTGGACGG CGCTCCGGCG GACGTCGATG TGGATGTGGA AATCGACCCG
GAAGACGTGA CCTCCGAGGA CATCATCAAC CAGGTGATGC TCTCGCGCCA GCGCCCGCCC
AATGTGAGCT ACTTCGCGTT CACGGCCACC CCCAAGTCCA AAACGCTTGA GCTGTTCGGC
CGGCCGGGCA CCGACGGGCT GCCCGTGCCG TTTCACGTTT ACTCGATGCG CCAGGCCATC
GAGGAAGGCT TCATCCTGGA CGTGCTCAAG CGGTACATGT CGTACAAGAC GTTCTACAAG
CTGGGCTCGA CGGCGGCCGA GAAGATGGTG CCGCAGATGA AGGCCAAGAA GACCCTGGGC
CGTTTTGCCG TCCTGCATGC CTATAACATT GCCCAAAAGA TTGTGGTCAT CGTGGAGCAC
TTTCGCGAGT TCATCGCGCC CAAGCTGGGG GGCCACGCCA AGGCCATGGT GGTGACTGAC
AGCCGGTTAG CCGCGGTGCG CTACAAGCTG GCCATGGACA AGTACCTCAA GGAGATGGGC
TACGACAAGG AGATGAAAGC GCTGGTGGCT TTTTCCGGAG AGGTGCAGGA CCCCGAGTCG
GGGCCGGATG ATTTCAGCGA ACGCAGTATG AATGCCGGCA TCAAGGGCCA GGAGCCATCC
GACGCCTTCA AGGAAGAAGT TTACCGCGTG CTGCTGGTGG CCAACAAATA CCAGACCGGG
TTCGACCAGC CGCTGCTGCA GGCGATGTAT GTCGACAAGC GCTTGTCTGG CGTGATGGCG
GTGCAGACGC TGTCCCGGCT CAACCGCATG GCGCCAGGCA AGGAAGACCC GTTCGTGCTG
GACTTCGTGA ACAAGCCTGA AGAAATTCTG GCCAGCTTCA AGCCTTACTT TCGCACGGCC
GAGGTGGAGG CCGTCACGGA CCCCAACATC GTTCACGAGC TCCAGGTTAA GTTGGACAAG
GCGAAGGTGT ACGTCCCCAA CGAGATTGAG CAATACGCCA AAGCCTTTTT CGACCCCAAG
TGCAAGCAGG CGAGCCTGAT GTATATCCTG AAACCTGCCA AGGACCGCTT CTACGACCTC
GAGGACGAAG ACGCCGAGCA GTTTCGCAAG GACCTGGGCA CCTTCTTGCG GCTGTACGAC
TTCCTGTCGC AAATCATTCC CTATGGGGAT GCGGACCTGG AAAAGCTCTA CAGCTTTGGC
AAAGGCTTGA TGCCCATGGT GGCGGCCAGG AATTCAGGCT CCAGCATCCT GGAGCTGGAC
TCGGACGTGC AGCTCACGCA CTATCGCATC CAGAAGCTGG GCGAGCAAAC GCTCAACCTC
GCCACGGGCG AGCTGGTCAA GCTCAAGCCG GCTTCCGACG CCGGCAGCGG CACCACCCAG
ACCGACGAAG AAAAGAAGCT GGCCGAAATC GTCGACAAGA TGAACGATTT GTTCTCCGGC
GAGCTGACCG AGGCCGACCT GGTGGGCTAC GTCACGACCA TCAAGGGCAA GCTGCTCGAG
AGCGAAACGC TGGCCGAGCA GGCCGTGAGC AACACCGAGC AGCAGTTCGG CATGGGCGAC
TTCAAGGACA TCATGATGGA CATCATCATT GATGGCCAGG AGAGCCACAA CAAGATTGCC
GGGCAGTTGC TCCAGGACGA CCGGACTTTT GCCATCATGC AGGGAATGCT GGCAAAAATG
GTGTTTGATG GTTTTAAGCG GGCAGCCGCG CAGGCTCAGG CCTCTTGA
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| Protein sequence | MTTIANVHTE RVFENELCEH LAANGWSVRT HLQDAKSYSR ELALFPEDLI AFVQETQPKE
WAKFKQWHNG QSEAMFTKRV ADQLNRHGTL HLLRHGFKDS GSNGTTKFFL CQFRPAHKKN
MQLWEMYEKN RLTAIRQLHY SLHNEKSFDM VLFVNGLPVA TTELKTDMTQ SIKDAIDQYK
KDRLPRDLKS KELEPLLQFK TRALVHFAVS TDEVFMATKL EGDKTYFLPF NLGRPDGFGG
AGAGNPPATK EHGYPTWYLW KLVWSRDVWL DILGNFLHIE VKEAQDKAGK KVTKESLIFP
RFHQLDAVLH LVRGAGDEGV GQVYLIQHSA GSGKSNTIAW TAHRLANLHS AQDDKVFDTV
IVITDRRVLD RQLQETISQF EHKAGAVQKI DQNSEQLAKA LNDGVPVIIT TLQKFQFILQ
KVQGLKDKKF ALIVDEAHSS QSGSAAQKLR RALTTDTKKV VTVELDGAPA DVDVDVEIDP
EDVTSEDIIN QVMLSRQRPP NVSYFAFTAT PKSKTLELFG RPGTDGLPVP FHVYSMRQAI
EEGFILDVLK RYMSYKTFYK LGSTAAEKMV PQMKAKKTLG RFAVLHAYNI AQKIVVIVEH
FREFIAPKLG GHAKAMVVTD SRLAAVRYKL AMDKYLKEMG YDKEMKALVA FSGEVQDPES
GPDDFSERSM NAGIKGQEPS DAFKEEVYRV LLVANKYQTG FDQPLLQAMY VDKRLSGVMA
VQTLSRLNRM APGKEDPFVL DFVNKPEEIL ASFKPYFRTA EVEAVTDPNI VHELQVKLDK
AKVYVPNEIE QYAKAFFDPK CKQASLMYIL KPAKDRFYDL EDEDAEQFRK DLGTFLRLYD
FLSQIIPYGD ADLEKLYSFG KGLMPMVAAR NSGSSILELD SDVQLTHYRI QKLGEQTLNL
ATGELVKLKP ASDAGSGTTQ TDEEKKLAEI VDKMNDLFSG ELTEADLVGY VTTIKGKLLE
SETLAEQAVS NTEQQFGMGD FKDIMMDIII DGQESHNKIA GQLLQDDRTF AIMQGMLAKM
VFDGFKRAAA QAQAS
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