Gene Pnap_4858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4858 
Symbol 
ID4685786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008759 
Strand
Start bp35461 
End bp36123 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID639826500 
Producthypothetical protein 
Protein accessionYP_973664 
Protein GI121583228 
COG category[S] Function unknown 
COG ID[COG2442] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.332293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAC CACTCTTTAT TCCCACTGCG CAAGCTGCAT TCATCGCTGG CCTGACGGAC 
CGACAGATGA ATCGGGTTGT GGACGAACAC CTTGTGCCGG AGCCCCTCTT TGAACAGCAA
GGCAACAGTC GCCTGTTCAC TCGCTTGGGC GCTGCGTTCG CAAAGTTCTA CTTTTCGACC
GAGGACCTAC TCCTCGCTGG TGCCCGTAGA CAAGTCCTCG ATGAGCTCAG CGCGCGAGTC
GACCGGCTGC AAGTGAAGGA CCAAGTCTTG ATGTTGACGC TGCTGGACTC CATGAGCTGG
AAGGTCGAGC GCAAGCATGT TGAAGTCGAT GTGCTGCCGT TCCTCCAAGA AGCCTTCTAT
CGCGCCAAGG AAGTGGACCA GGCGGACGCG CTGGTGACCA CCAACCCCGA AGTCATGGGT
GGAGTACCGG TATTTGTGGG CACGCGGGTG CCTTTCGGTA TTGTTCTGGG CTCGTTGGCG
GCAGGCGTCC ACCTAGGCCG CCTGCAGGCG TCATACCCCT TCTTAACCGA AGCGCACATT
CAGGCCGCCA AGGTCTATGA GGCAGTCCAT CCTCGTCGAG GTAGGCCCCG TCGTATTGCC
GATGTGAATC CGGAGCTTGA GCGTCGTGTA ATCCGGGTCA TCAAGCGCGC CGCCAGTGCA
TGA
 
Protein sequence
MPTPLFIPTA QAAFIAGLTD RQMNRVVDEH LVPEPLFEQQ GNSRLFTRLG AAFAKFYFST 
EDLLLAGARR QVLDELSARV DRLQVKDQVL MLTLLDSMSW KVERKHVEVD VLPFLQEAFY
RAKEVDQADA LVTTNPEVMG GVPVFVGTRV PFGIVLGSLA AGVHLGRLQA SYPFLTEAHI
QAAKVYEAVH PRRGRPRRIA DVNPELERRV IRVIKRAASA