| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4613 |
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| Symbol | |
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| ID | 4685814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | - |
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| Start bp | 1595 |
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| End bp | 2566 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639826614 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_973777 |
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| Protein GI | 121583346 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCC GCTTCACTCC TTCACTGCTT GCATGGTTAC GGTGCTTCGA GGCAACAGTT
CGATACCGCA GCTTCACCAA GGCCGCCTCG GAGTTGTGCG TGACCCAAGG CGCCGTCAGC
CAGCAGGTCA AGCATCTGGA GGACTGGTTG CAGCGCCCCC TGCTTTTGCG TACGCCGCGC
TTGCTGGTAC CAACCCCCGA AGGCCAGTGG CTGGCCGTGG TACTGCGCGA GTCGTTCCAG
GCCATCGAAG GCACCTTGAT CCAGCTGCGC AGGAAGCAGG AAGACTTGAC CACCGCGCTG
AGTTGCGCGC CTTCCTTCGC GATGGGCTGG CTGACACCGC GCCTGGGCGA GTTCTTTCGC
GCTCATCCGG ATGTCAACCT GCGGGTGATC GGCGAATTTC ACGCGCTGGA CCGCGAGCGC
ATGGCACGCG ATGACGTTGT GGCGGCGGTC CGCTACGACC TGGGCGAATA CCGGGATCTG
CAGGCCACCG CATTCCTGGA CGAATGGCTG ATTCCGGTCG CCAGCCCGGT TTTCCTTTCT
GCGCATCCGC AATTGCAGAC GAAGGCCGAC TTGCGCGCTC CGATGCTCCT GCATGACACC
AGCCCCTGGG TCGGCGCTGG TCCGTTCGAG GAATGGGAGC ATTGGCTTGG GCACGTGGGG
GCGGACGTGC CCCAATTGGC CCAGGGCCAT CACTACAATC TGTCGCAGCT CGCCATTGGC
GCGGCGCTGG CCGGGCAGGG CATTGCCATG GGCCGTGCGG CGCTGGTGTT CGATGACCTG
GCGGCCGGCA GGCTGGTCGC GCCCTTTACG CAACCGGTGC GCTCGCGCGC TTCGTATTTT
TTCCTGAGCG GCATGGACCC GTCGCCCCAC GTCATGCTGG TGCAGGGATG GCTTGCCGCG
CAGGCGGCAG TTTTTCGTGG ACGGCGTGAC GCGCTTCTGG TTGGGCTTGC CGCTGCACTG
CACGCGCAAT AG
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| Protein sequence | MEIRFTPSLL AWLRCFEATV RYRSFTKAAS ELCVTQGAVS QQVKHLEDWL QRPLLLRTPR
LLVPTPEGQW LAVVLRESFQ AIEGTLIQLR RKQEDLTTAL SCAPSFAMGW LTPRLGEFFR
AHPDVNLRVI GEFHALDRER MARDDVVAAV RYDLGEYRDL QATAFLDEWL IPVASPVFLS
AHPQLQTKAD LRAPMLLHDT SPWVGAGPFE EWEHWLGHVG ADVPQLAQGH HYNLSQLAIG
AALAGQGIAM GRAALVFDDL AAGRLVAPFT QPVRSRASYF FLSGMDPSPH VMLVQGWLAA
QAAVFRGRRD ALLVGLAAAL HAQ
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