| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4566 |
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| Symbol | |
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| ID | 4685490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008758 |
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| Strand | + |
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| Start bp | 129919 |
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| End bp | 131268 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639826413 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_973578 |
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| Protein GI | 121583137 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATC GGATGTCCAG AAGAATTAGA AAAAATTGCT GGCCTTGCAT TTTGCTGGTG
CTGGCCACAA GCAGCGCCTG GTCGCAGCAA GCGTCACCCG GGTCACTTGG AGAAATTTCA
AAGTCCGATT TGTCGCTGGC TGCCGCCTCC TTTCCTGGAA GTATCAGTCT TCCAACAACG
CTAAAACAGG TTTTTGACGC CGCATGGCTG CGTCAACCCG AAGCGCAGTC CAAGGAGGCT
CGCCAGCAAG CCGCCAGTGC CCGCAGGCTG GTAGCGGACA GTTGGACGGC TGAGCCTGCA
GCCCTGGAAT TGTCAACCAA GAGCGATCGA TTGAATAACA ACCAGGGCAG CCGCGAGCTT
GAGGCCGGCT TGGCTATTCC GCTATGGCTA CCAGGCGAGC GAGCGCGTTC CGTCAACCTG
GCCGATGCGG AGATGCGTGT GGCAGCGAGC CGGGTCATGG CGGCTCAGTT GCGCACGGCG
GCAAGCGTGC GGGAGTCGTA TTGGCTATGG CAACGTGCCC GGATCGAGCA AGATCTTTCC
CGGGAACGGC TAATTAATGC ACAGCAGTTC GCTGCTGACG TCGCCAGGCG TGTCAAAGCC
GGCGACCTGG CGAGGGCCGA TCAACACCAG GCCGATGGGG CGGTGGCAAC TGCCGAGGCA
GGACTTGCCG AAGCAATCAG CGCGCTGGCT GGCGCATCAC ATGAGCTGCG GGCACTGAGC
GGTATCCCAC CAGGACCGAA CGCCCTTCCC GCGCTCGACG CGCAGGCTGT GACCGAGCCT
GTCCCGGAGG TACCTGCTGA TTTCGCAATT CTGAATGCCG GCCACCCGGC GGTTGTAGAA
CTGTTGGATC GGGCGAACGT CGCGCGCCGC ACAATCGAAC TGACCGGTGT GCAAACGCGC
GCGAACCCAG AGTTGATGCT GGCGACGACC AGAGGTCGGG GGTTCTCCGG CGAGCCTTAT
CAGCAAACCA TCACGCTGGG CATTCGCATC CCTTTTGGAG CAGACAGTCG CAATCGAGCC
AAGCAGGCAG CAGCACAAGC CGACGGTATT GAAGCCGAGG CACAGCTTGA TCTCGAGCGG
GGGCGGCTGG TGTCTGAACT CGACGCGGCC CGCGTTCGCC TCGAATCCGC CCAAACGCAG
GTGAATGCTG CAAGCAAGCG TTCTCAACTC GCCCGTGAGT CACGCAGCTT TTTCCAAAAA
TCATTTCGCA TGGGTGAAAC CGACCTGCCG ACACGATTGC GCGTTGATCT TGAAGCTTCC
GATGCCGAAC GACAGGCCGG ACGGAGCCGC ATCGATCTCG CTGCAGCAGT CTCAGCCTTG
CGCCAAGCCC TGGGACTGCT TCCTGAATAA
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| Protein sequence | MENRMSRRIR KNCWPCILLV LATSSAWSQQ ASPGSLGEIS KSDLSLAAAS FPGSISLPTT
LKQVFDAAWL RQPEAQSKEA RQQAASARRL VADSWTAEPA ALELSTKSDR LNNNQGSREL
EAGLAIPLWL PGERARSVNL ADAEMRVAAS RVMAAQLRTA ASVRESYWLW QRARIEQDLS
RERLINAQQF AADVARRVKA GDLARADQHQ ADGAVATAEA GLAEAISALA GASHELRALS
GIPPGPNALP ALDAQAVTEP VPEVPADFAI LNAGHPAVVE LLDRANVARR TIELTGVQTR
ANPELMLATT RGRGFSGEPY QQTITLGIRI PFGADSRNRA KQAAAQADGI EAEAQLDLER
GRLVSELDAA RVRLESAQTQ VNAASKRSQL ARESRSFFQK SFRMGETDLP TRLRVDLEAS
DAERQAGRSR IDLAAAVSAL RQALGLLPE
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