Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4534 |
Symbol | |
ID | 4685557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 102997 |
End bp | 104595 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639826384 |
Product | transposase IS66 |
Protein accession | YP_973549 |
Protein GI | 121583108 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCAA CGCCTGCTGC CGAAGAATTC AACGCCTTGA AGGAGGCGCT GGCGCAGGCT TTACGGCGCA GCGACGCCCT GGCAGGCGAG TTGCGCATGG TGCGCGCCGA GCGTGACCTG CTTCAGGAGC GGCTCAAGCA GTCCATGCGC AAGCTCTTTG CCGCGCGCAG CGAAGCGGGC AGCGCGCAGC AACGGGACCT GTTCTTCAAC GAGGCCGAAG CGCTGGGCGC GGCCAGCGAG CCGGCCGCCA GCGACGGCCG CGAAGACGAC ACCCAGGAGG TGCGCGCCCA CCAGCGCGTG CCGCGCGGAC GCAAGCCGCT CGATGCGGCC TTGCCCCGGG AGGTGGTGCG CCACGAACTG CCCGAGTCCG AGCGGGTGTG CCCGCACGAT GGGGCCGCCT TGGTGGAAAT CGGCGTGGAG ACCAGCGAGC TGCTCGACAT CATTCCCCAG CAGGTGCGCG TCATTCGCCA TGAACGCGTC AAATATGCCT GTCCCTGCTG CGATGGCGGA TTGCGCCTGG CGTCCAAGCC GGCGCAAATC ATTCCCAAGG GCCTGTTCAG CGAAGGGCTG CTGGCCTGGG TGATTGCCTC GAAGTATTGC GATGGCCTGC CGCTGTACCG CCAGACGGCG CTGCTCGCGC GCTTTGGCGG CGACTTGGCG CGCAACACCC TGGCCGCCAG CGTCGTGCGC GTGGGCCGGG AGGTCCAACC CATCATCAAT GTGCTGCGCG ACCATTTGCT GGACTCGCCC CTCATCCATG GCGACGAAAC CCATGTGCAG GTACTCAAAG AAACCGGCAA AAGCGCACAG TCCAAAAGCT ATATGTGGGT GCAGACGACC CCGTGCTCCG GGGTGCAGGG AGCCGGGCCA CCCATCCGGC TGTTTGGCTA CGCGCCCTCG CGCAGCACGG CCGCCGCCCA AATTCTCTAT GCCGGGGTGC GCGAGGGCAG CGTGCTGATG ACGGATGGCT ACGCGGTTTA TGACGCCATT GCGCAGACGC ATGGCCTCGT GCACCTGGGA TGCTGGGCGC ATTGCAGGCG CGGGTTTCAT GAAGCGCTGC AGGCGCTGCC CAAGAACGCG CGCGGCCCCG AGCAGCTCGC TGCGCGGTTT CTCGCGCTCA TCGCCCAGTT GTATGCGGTG GAGTCGCGCG CACGCGAGCA CCGGCTCCCT CCCAAGGAAT TGCTGGACCA GCGGCAACAG CACAGCGTGC CCGTGCTGGG CCAGATAGAG GCTTTGCTGC TGGCCAACGT GCATGCCGTG CTGCCGGGCA GCTTGCTGGG CAAGGCGCTG CATTACCTGG CTTCGCAATG GACGAAGCTG GCGCTTTATG TCACCGATGG CGCCTATCCG ATAGACAACA ATGCCTGCGA AAATTCGATT CGTCCGTTTG TCATTGGCAG GCGCAACTGG CTCTTCAGCG ATACGGTGGC CGGCGCCCAG GCCAGCGCCA ACCTGTATTC GCTGCTGCAG ACCTGCGCGG CCAACGGCGT CGATGGCTAC GCGTACCTGC GCGCATTGCT CAGCGCGCTG CCCATGGCAA AAACGGCCGA TGACTACGAA GCGTTGCTGC CTTGGCGCAT CGAGCTGCCC AGCCGCTGA
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Protein sequence | MLATPAAEEF NALKEALAQA LRRSDALAGE LRMVRAERDL LQERLKQSMR KLFAARSEAG SAQQRDLFFN EAEALGAASE PAASDGREDD TQEVRAHQRV PRGRKPLDAA LPREVVRHEL PESERVCPHD GAALVEIGVE TSELLDIIPQ QVRVIRHERV KYACPCCDGG LRLASKPAQI IPKGLFSEGL LAWVIASKYC DGLPLYRQTA LLARFGGDLA RNTLAASVVR VGREVQPIIN VLRDHLLDSP LIHGDETHVQ VLKETGKSAQ SKSYMWVQTT PCSGVQGAGP PIRLFGYAPS RSTAAAQILY AGVREGSVLM TDGYAVYDAI AQTHGLVHLG CWAHCRRGFH EALQALPKNA RGPEQLAARF LALIAQLYAV ESRAREHRLP PKELLDQRQQ HSVPVLGQIE ALLLANVHAV LPGSLLGKAL HYLASQWTKL ALYVTDGAYP IDNNACENSI RPFVIGRRNW LFSDTVAGAQ ASANLYSLLQ TCAANGVDGY AYLRALLSAL PMAKTADDYE ALLPWRIELP SR
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