| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4388 |
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| Symbol | |
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| ID | 4685170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 301600 |
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| End bp | 304725 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639826243 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_973408 |
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| Protein GI | 121582966 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.33249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA TTGAGACAGT ACGCACGGCC TTCGGCCGCC ATTTCCAGCA CGTTGTCGAG
ATGGGCAACG GAGTGGTCCG GGGAGAACGC CAGCACAACG GCAAGCCCTA CGCGGTCGCC
TACGTCGACC TGTCCGATGA GGTCGTGGAG CGGGCGCACG GCCTTCAGAG CTATCAGGAA
CGCCTCATCG GTGCTGACTT CTTCTCGTCG GACAACGACC TGCGGTGGAA TAGCTATTTG
TTCTTCTGGG CAGGGCCCAA ATCGGCAGCG AGCGAGGAGT TTCAACAAGC GAAGAAGCTA
ATTGAGTCAG ACAGACATTT CGCTCGGAAA TTCGTTCTCA ACGAAGATGA CTTGGAGCGC
CGCTTGGGGC AGAAGCCCCA GGCTGTTGCA ACGCCTGCGA CGCAACAAGG TGATGCTGGT
ATTGCGTGGG CCGAGCTACT CCGCGCAGAT TCTCTGGCAA TGCTCCTGGA GCAGAGGCCG
AGAACAGCGA CTCTGGAGTT GATAGAAGCT GGCGAAGCAT TCAAGGCTGA CGTAGGCGCG
CCGGCCCCGG CAAAGGCTTC AGCAACGGAC GCGCTCGCTA CTGGGATGCT GCGCAAGCTT
TCGATTCAGC AATTCCGGCG CATTCATCAG AGCACGGAGT TTGAGTTTGG CGATGTGAAC
CTCATCACGG CGCCGAACGG GATGGGGAAG ACTTCCTTGC TGGAAGCAAT CGAAGCCTTC
TATTGCGGCC GAGTGCGTCG TGACCCCGAG GCCGTGTTTG AGGGTATTTC GGGCGAGCTA
GAGGCACCTG ACGGCCGCCG GCATGCCGTC AAGCTCACTA AGGTTCCTGC GACGCTGAAG
GCGCGCAATA TGGCTTGGTA CGGACGGACC GACGTGCATG CCCAGGCCAT CTCGCAAGGA
TTCACTCGCT TCAACTTCCT TGATACGGAT GCGGCCTTCC GCCTGTCGTC GGAACAAGAC
CCCGAGCAGA TTCAGCTTGA CCTCGGCCGG CTGATTGTCG GCCCGGATAC GACGCGTCTT
TGGACCTTTC TGTCCAAGCT GAAGGATGAC GTCGATACGC GACTGAAAGC ACTGGAGGGG
CAGCAGCCTA GCGATGAGCT CAATGTCGAC TTGCTGGAGA AAGAGGTAAG TCGACTGGAG
ACAACCCCGT CTGAATCCAC CAGTCTGCGC GTTGCGTTCC GGGAAGGCGT TGTTCGACTT
CGGCCAAGGT GGGTAATCCC AGATGCCAAT ACTCAGCTGA ACGAACAGGA AAAGAGCTCG
GTTGCCGAAC TCAAGAGCGC CATAAACCGT GCTCTTGCTG CCGCACCAGT CACGCCAGGC
AACAAAAGCG TCCTTCAAGA GCAACTCGCC AAGATGAAGG CGTCCCTGGC CGAAGCGAGG
AGGATTCAAT CCTCGTATGA AGCCGCTGTA CGTGAAGCGA ATGCCGCCGC TGAGAACCAG
AAGGCGAGCA AAGAAAATCA ACGCTTGGCG GAGTTGTGGG AAAAGATTCT GCTTGCAGGA
GTGCCGGAGC TGGAAAAGCG AATTGGTATA GCAGAACAGC AGGTACAGGC GTTGAGGACC
GCCTTGCCTA GCTACCGGGA GGATGCGATT GCTAGCTTTC CCGAGAAGTA TTTCCCTCTC
GCGCTGAAGG ATGCCCTGTC GGACGCGAAG CGGGAATCCG ACCTGGCGCA AGAGTCTTCT
CAAACTGCAT CGCGGGCGCT GTCGCAAGCG CAAGAGCTCG GACAAACGTT GGTCGCTTTG
CGGCGCGATT TGCACGACGC CTCCGTCGCG GTCATGGGGC AGACTGGAAA TCTGACCGAA
TGCCCCGTGT GCAAGACAGT CCATGCCGAG CAAGACCTTG CCGAAAAGCT GCACGCGCTC
ATTGGCTCTG GCGACTCGCA AATGTCGGCA GGGCTCAGGC AACGTGCACA AACGGCCAAG
CAGAACACAG ACACCGCTCA GCGTGCCCTG GAAGCCCTGC TGACCCTGGC AAAGTGGCAA
CAGGCCGCTG GCCTGGCAGA CGACTTGGCA TGCAAGGACT TATTCACGCA GCTACAGCAT
CAGCACGAGA AGCTGAGGGC CGCGCTCCTT GAGTTGCAAG AGGCTCGACA AGCTGAGAAG
ACGCTTGGTG CTACAGGAAT TCGATTGGAT GGCTGGCAGC TGGCCCGTGC AAATGCTCAA
CGAGGCTTGT CAGAAGGGGT CAACGTGAAC GACAGGACGC GGTTGCGCCA GGCAATTGAG
TTTATGGCGG TACAAATCGG GTTTAACGTC CTGGCGCACG TTCTCACAGC AAAAAAGCCG
CAGACGCTAG CCAATGAAGC GACGATGCTT GCAATAGCAA CTGGCGCATC CAGAGGAGTT
CCGATGCTGC CGTCTCAGAC GGTAGTGGCT GTGGAACGCT TAGTACAGCA GGCCGAAGCT
CGTGTTGCGG CTGCAGCAGA AGTTGAAAGA GCTATTGACT GGCCGGTTGA TGCCGCCTAT
GAAACGCTGC TGTCGGAAGT TCAATCCTGC CTTTTGGCAT ATGACAAGGC CGACCACGCA
GCAACCCAGG AGACAGAAGC GGATTCAGTC CTCAAGCAAA AGCTAAAGGA CCTGGCCGAG
GCTAGAGCCC GACAAGCGAA GCATGAAGCG TCTCGCAAGA ACCTGGCGCG CGCTGCAGCG
ACGCTATCGA AAGTCGTAGA CGAGCACTCT CTCGAAACCG TGACGTCCGA GGCATTGCGC
GCGATTCGAA GCAAAGTGAG CGACGTTTTT TCTCAGATTC ACTCGCCGCC AGAGTACGCC
TTGGGCAACT TCGAAGATGG GCAGCTCATC GTGCGCCGCG AAGACGGCGC GACCCACGCC
GTCAATCAGG TCAGCACCGG TCAGCGTGCG GCCCTAGCGC TTTCCATCTT CCTGGCGCTG
AACGAGAGCG CCGGCACTGC CCCGCCCGTC ATACTCATTG ACGACCCGGT GGCGCATATC
GACGACCTCA ACGCCTTGTC GTTCCTCGAC TACCTGAGGG AACTCGTGGT GAGTAGCAGG
AAGCAAGTCT TCTTCGCGAC TGCAGACGCG AGGTTGGCGG CCTTGTTCCA ACGAAAATTC
GATTTTCTGG GGCCAAACAG ATACCGGCGA ATCAACCTCG ACGCCCCTCA GGCAACTGCA
CAGTAG
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| Protein sequence | MTNIETVRTA FGRHFQHVVE MGNGVVRGER QHNGKPYAVA YVDLSDEVVE RAHGLQSYQE
RLIGADFFSS DNDLRWNSYL FFWAGPKSAA SEEFQQAKKL IESDRHFARK FVLNEDDLER
RLGQKPQAVA TPATQQGDAG IAWAELLRAD SLAMLLEQRP RTATLELIEA GEAFKADVGA
PAPAKASATD ALATGMLRKL SIQQFRRIHQ STEFEFGDVN LITAPNGMGK TSLLEAIEAF
YCGRVRRDPE AVFEGISGEL EAPDGRRHAV KLTKVPATLK ARNMAWYGRT DVHAQAISQG
FTRFNFLDTD AAFRLSSEQD PEQIQLDLGR LIVGPDTTRL WTFLSKLKDD VDTRLKALEG
QQPSDELNVD LLEKEVSRLE TTPSESTSLR VAFREGVVRL RPRWVIPDAN TQLNEQEKSS
VAELKSAINR ALAAAPVTPG NKSVLQEQLA KMKASLAEAR RIQSSYEAAV REANAAAENQ
KASKENQRLA ELWEKILLAG VPELEKRIGI AEQQVQALRT ALPSYREDAI ASFPEKYFPL
ALKDALSDAK RESDLAQESS QTASRALSQA QELGQTLVAL RRDLHDASVA VMGQTGNLTE
CPVCKTVHAE QDLAEKLHAL IGSGDSQMSA GLRQRAQTAK QNTDTAQRAL EALLTLAKWQ
QAAGLADDLA CKDLFTQLQH QHEKLRAALL ELQEARQAEK TLGATGIRLD GWQLARANAQ
RGLSEGVNVN DRTRLRQAIE FMAVQIGFNV LAHVLTAKKP QTLANEATML AIATGASRGV
PMLPSQTVVA VERLVQQAEA RVAAAAEVER AIDWPVDAAY ETLLSEVQSC LLAYDKADHA
ATQETEADSV LKQKLKDLAE ARARQAKHEA SRKNLARAAA TLSKVVDEHS LETVTSEALR
AIRSKVSDVF SQIHSPPEYA LGNFEDGQLI VRREDGATHA VNQVSTGQRA ALALSIFLAL
NESAGTAPPV ILIDDPVAHI DDLNALSFLD YLRELVVSSR KQVFFATADA RLAALFQRKF
DFLGPNRYRR INLDAPQATA Q
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