| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4283 |
|---|
| Symbol | |
|---|
| ID | 4685203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008757 |
|---|
| Strand | - |
|---|
| Start bp | 182344 |
|---|
| End bp | 186045 |
|---|
| Gene Length | 3702 bp |
|---|
| Protein Length | 1233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639826142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973307 |
|---|
| Protein GI | 121582865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACG CCCCCCAGCT TCTGACCGAC CTCAAGCGCC GCCTCGCGCT GCTCGAAAGC
GACCTGCGCG AGCGCATCCA CACGCTGCCC GACCTCAAGG CCAGCCTGCA AGCCGAATGG
CAAGTCGCCC GCGATGCCAA CCGCACGGCC GAAACGCTGG AGAGCTGGAG CGACCAGGTC
ATCACCCAGG CCGGCGTGCA TTGGCTGCTG AGCTGCGTGT TCCTGCGCTT CATTGAAGAC
AACACCCTGG TCGAGCGCCC CTGGATCGGC GGCACGCCGG GCAGCGGACG CCTGGTCCTG
GCGCGTGACC GGCATGAAAC CTACTTTCGC GCCAGCCCGC TGGAGAGCGA CCGCGATTAC
CTGCTGGCCT GCTTCACGGA GGCCGGCACG CTGCCCGGCC TGCACACCTT TTTTGACGCC
GCGCACAACC CGGTGTTTCG CCTCGGCATC AGCGGCGACG CGGCCATGAG CCTGCGCCAG
TTCTGGCAGC AGCAAGACCC CAACACCGGC GCGCTGCTGC ACGACTTCAC CGACGCCAGC
TGGAACACCC GCTTTCTGGG CGACCTGTAC CAGGATTTGT CCGAAGCCAC CCGCAAGCGC
TACGCCCTGC TGCAAACGCC CGAGTTCGTC GAGGAATTCA TCCTGGACCG CACCTTGACC
CCGGCCATCC GCGAGTTTGG CTACCGCGAG GTGCGCATGA TCGATCCGAC CTGCGGCTCG
GGCCACTTCT TGCTGGGCGG CTTTCAGCGC ATGGTGGGTG AATGGTCCCG CGCCGCGCCC
GCCCACAACC GGCGCGACGT GGCGCAAAAG GCGCTCGACG CCGTGGCCGG CGTGGATTTG
AATCCGTTTG CGGTGGCGAT TTCTCGCTTT CGGCTGCTGC TGGCCGCGCT GCAGGCCAGC
GACGTGCATC GTTTGAGCGA CGCGCCGGAT TTCACGATCC ATGTCGCCAT TGGCGACAGC
CTGCTGCACG GGCAGCGTTT TGGCCTGTCG GGGCAATCGG GCATCCAGTC CGACGACCTG
TTCGACGTGG CCGAAAGCCA CGCCGACAGC GGCCTGGCCC ACGCCTACGC CAGCGAAGAT
TTAAAACTGG TGCAGCGCAT CCTGGGCCGC CAGTACCACG CGGTGGTGGG CAACCCGCCT
TACATCGTTG TCAGGGACGC GGCGCTGAAC GCCGCTTACC GCAGCCAGTA CGCCAGTTGC
CATCGGCAAT ATTCGCTGGG CGTGCCGTTC ACCGAACGTT TTTTTGAGCT GGCCGTGACC
GGGCGTCCTG CCTTACTCCC TCTCCCTCAG GGAGAGGACC GGGGTGAGGG CGGCCCCGGT
TCGGCCGGCT TTGTCGGCCT GATCACCGCC AACTCCTTCA TGAAGCGTGA GTTCGGCAGC
AAGCTGATAG AGCAGGTGCT GCCTCGGCTG GACCTGACGC ATGTGGTGGA CACCTCGGGC
GCCTACATTC CCGGCCACGG CACGCCGACG GTGATCCTGT TTGGCCGCCA TCAGACGCCG
AAACCCGACA ACCCGATTCG CACCGTCATG GGCATCAAGG GCGAACCCAG CGCGCCGAAC
GACCCGGCGC ACGGGCTGGT GTGGTCGGCT ATCTTGTCGC AGATTGACCG CGCCGGGTCA
GAAAGCGAGT TTGTTAGCGT GGCCGATATG GAGCGCAAGG GCTTGGCCAA ACATCCGTGG
AGCATTGGCG GTGGCGGTGT GGCTGATGTA AAAGAGCAGA TTGAAGCAAA CACCGTCCCA
TTGTCATCAA TCACGACTGA TCTCGGATTT GTCTGCATCA CGAAAGCTGA CGATGTTTTT
GTGCTTCCAC TGGAGGCGGC AATTCGGAAA GGGTGCGAGC CTGCGGTACT GAAAGCTTTT
GCAGTAGGTG AAGATGTTCG CGACTGGACA GTTAACAGCG AAAACATTTG TCTGTTTCCC
TACAGCGATA AGGCTGAACT TCGACCTGCG AGCGATCTTG CGAATGCATT GCGCTTTATT
TGGCGATGCC GAACATCCCT TCTCGACCGA AAGATTTTTG GTGGTGAAAC CTATCGCGAA
ACGGGAAAGG CTTGGTATTC ATACGGACAG ATACCTGCAG AGCGTTTCAA GATCAGGACT
GCGATTACTT TCGCCTTCGT CGCCACCTAC AACCATTTCG TCCTTGACCG AGGCGGCAAG
GTGTTCAACC GCACGGCGCC GGTCATCAAG CTGCCCGCCG GGGCAAGCGA GGACTCGCAT
TTGGGCTTGC TCGGGTTGCT CAATTCGTCA ACCGCAGGTT TCTTCTTGAA GCAGGTGTGT
TTCAACAAGG GTAATGGTGG GATTGGTGGA GGAATATCGG ACGAGCATTG GGAGTTGCGT
TACGAGTACA ACGCGTCACA GCTTGTTGAT TTTCCAGTCG TAGAAAATCG CCCCCTCGAC
CTCGCCACCC ACCTCGACCA TCTGGCCAAC CAGCTTGCCG CCTCACAACC CGCCGCGCTG
CTGGCCGCCG CCCACGCGGG CACCGAAGCG CTCCCCACCC GCGCCAGCCT GGACGCCGCC
CGCGTCCATG CCACTGAACT GCGCCGCCAG ATGATTGCCG GTCAGGAAGA ACTGGACTGG
CGCTGCTACC GCCTTTACGG CCTGCTGCCA GCCAGCAGCC AAGCCGCCGA TGTCGAGCAC
GCCGCGCCGC CCGAAGTCGC GCTGGGCGAG CGCGCTTTTG AAATCGTGCT GGCCCGCCGC
GTGGCTGCCG GCACGGAAAC CACCACTTGG TTCGAGCGTC ACGGCTCGAC ACCCGTCACC
GACATTCCCG GCCACTGGCC TGAGGATTAC CGCCAGGTGG TGCAGCGCCG CATCGACCTC
ATTGCCAGCG ACCGCAACAT CGCCCTGATC GAGCGCCCCG AGTACAAGCG CCGCTGGAAC
TCGCCCAAGT GGAACGATCT GGAGCAAGCC GCCCTGCGCG ACTGGCTGCT GGCCCGGCTC
GAACTGCCCC GTTACTGGCC CGCCAGCGCC GATCAGCCGC CCCAGCTCAC CTCGACCAGC
CGCCTGGCCG ACGCTGCCCG GATGGACGCC GACTTCATGC AGATGGCCAC GCTCTACGCA
GGCCACGCCG ATTTCGACAT CGGCCAGCTC GTCGCCCAGC TGGTCGCCAG CGAAGCCGCG
CCTTTCCTGC CCGTGCAGCG CTACACCGAA GCAGGCCTGC GCAAGCGCGC CCAGTGGGAA
GCCACCTGGG CCTTGCAGCG GCGCGAGGAT GCGGGGGAAG ACTTGACGGC GAGCGTCGGC
GCCATTCCGG TTCCGCCCAA GTTCAAAAGC ACTGATTTTC TGAAAACCGA TGTCTGGCGC
CTGCGCGGCG GCCTGGACGT GCCCAAGGAG CGCTGGGTCA GCTACCCCGG CTGCGAACGC
GGCGCCGACG GCAGCCTGAT CATTGCCTGG GCCGGCTGGG ACCACCTGCA GCAAGCCACC
GCCCTGGCCG GTTTTTACCT AGACATGAAA GACAGCGAAG GCTGGCCCCC CGAGCGCCTG
CAACCCCTGC TGGCCGGCCT GCTGGAGCTG GTGCCCTGGC TGGCGCAGTG GCACAACGAA
GTCGATCCGG TCTATGGCGA GCGCATGGGC GACTATTACC AGGGTTTTGT GGCCGAAGAA
GCCCGTGCCC AGGGCTTCAC GCTCGATGAC TTGCGGGCCT GGACGCCTGC CGCCACGGTC
AAAGCGCGTG GACGGCGCAA AGCCACGGCC GCCAGCGAAT GA
|
|---|
| Protein sequence | MINAPQLLTD LKRRLALLES DLRERIHTLP DLKASLQAEW QVARDANRTA ETLESWSDQV
ITQAGVHWLL SCVFLRFIED NTLVERPWIG GTPGSGRLVL ARDRHETYFR ASPLESDRDY
LLACFTEAGT LPGLHTFFDA AHNPVFRLGI SGDAAMSLRQ FWQQQDPNTG ALLHDFTDAS
WNTRFLGDLY QDLSEATRKR YALLQTPEFV EEFILDRTLT PAIREFGYRE VRMIDPTCGS
GHFLLGGFQR MVGEWSRAAP AHNRRDVAQK ALDAVAGVDL NPFAVAISRF RLLLAALQAS
DVHRLSDAPD FTIHVAIGDS LLHGQRFGLS GQSGIQSDDL FDVAESHADS GLAHAYASED
LKLVQRILGR QYHAVVGNPP YIVVRDAALN AAYRSQYASC HRQYSLGVPF TERFFELAVT
GRPALLPLPQ GEDRGEGGPG SAGFVGLITA NSFMKREFGS KLIEQVLPRL DLTHVVDTSG
AYIPGHGTPT VILFGRHQTP KPDNPIRTVM GIKGEPSAPN DPAHGLVWSA ILSQIDRAGS
ESEFVSVADM ERKGLAKHPW SIGGGGVADV KEQIEANTVP LSSITTDLGF VCITKADDVF
VLPLEAAIRK GCEPAVLKAF AVGEDVRDWT VNSENICLFP YSDKAELRPA SDLANALRFI
WRCRTSLLDR KIFGGETYRE TGKAWYSYGQ IPAERFKIRT AITFAFVATY NHFVLDRGGK
VFNRTAPVIK LPAGASEDSH LGLLGLLNSS TAGFFLKQVC FNKGNGGIGG GISDEHWELR
YEYNASQLVD FPVVENRPLD LATHLDHLAN QLAASQPAAL LAAAHAGTEA LPTRASLDAA
RVHATELRRQ MIAGQEELDW RCYRLYGLLP ASSQAADVEH AAPPEVALGE RAFEIVLARR
VAAGTETTTW FERHGSTPVT DIPGHWPEDY RQVVQRRIDL IASDRNIALI ERPEYKRRWN
SPKWNDLEQA ALRDWLLARL ELPRYWPASA DQPPQLTSTS RLADAARMDA DFMQMATLYA
GHADFDIGQL VAQLVASEAA PFLPVQRYTE AGLRKRAQWE ATWALQRRED AGEDLTASVG
AIPVPPKFKS TDFLKTDVWR LRGGLDVPKE RWVSYPGCER GADGSLIIAW AGWDHLQQAT
ALAGFYLDMK DSEGWPPERL QPLLAGLLEL VPWLAQWHNE VDPVYGERMG DYYQGFVAEE
ARAQGFTLDD LRAWTPAATV KARGRRKATA ASE
|
|---|
| |