| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4258 |
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| Symbol | |
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| ID | 4685186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 132049 |
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| End bp | 135375 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826118 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_973283 |
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| Protein GI | 121582841 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC AGGAAACTCC TTTCATGCTC AAGGACCTGC TCGGCGCCCG CGTGACGGCC
AGGGATTTCG ACCCGACCCA GTGGCAAGTC GGCCAGGAAG TGGTGCTGCG GCTGCGACAG
GACGAATTGC TGCTACGGCA AAACGATCAG GTGACGGCCC TGGCACTGAC ATCGGAGTCT
GGATCGATGG ACTTTCATGC CCAGAACCTC GATGCCTTGT GGCTGCTGGT GCGTGTCAAG
CCCGGCATGG TCTGGCTTCA ATGCCTGGTG CCGATGCAGA CCTGCCAGTG CGAGCCTGGC
TTGGACTTCG GTGCGGATCA ACGCACGGCA GACAGCCTGC ATCAGCAGCA GCTCATCGGG
CAGCCCGACA TCGCCGAAGC AATGCGCTGG CTGATGGAGG AATTTGTCTG CACGACAGAA
GATGGCTCGT CCAGCCGCGT GTTCATGGCC ATCCATGCTC GGCAGGATCA GCGGCAGATG
CAATTGGTCG GGCGCCGTTA CGTGGTGGAC TTGAAGCGCG ATGCCGAGCA GGCGCTCTGG
GTGGAGCGCA TTGCTAAGCG TCGACGTGAA AGTGACGAAC CTTTTGCCCT GCTCAACGGC
CATAACCGAT TCGTCGATGC CAGCCAGGGC ATGCAGGCGC AAACCGGTGC GCAGCGGGCA
ATACTCGATG CAGCAGTCAA CAGTTTCGGC ACTTATTTGG AACTATGGCA TCTCTACGGC
CAGAAAGAAT GGGACAAGGA TGTGCAGCGA GCATCCGAGC TCAAGGCGTT GCGCTACAGC
GCCTGCCAGC CTGCCAGCGA GGAAGGCGGC GGATGGCGGC TGAGCGTGCA GCGTGATGAA
TTGAAAGAGT TTTCCCAGCG TTGGCGCACT CTGGCTGGTG ATGATGACCA GCTTGAAATC
GATGAAGACG CGCCGGACTG GAGCAGCGAG CATTACACCG ATCTGAGTGT GCGCGACAAG
CGGCGCCTGT TTCGCGGCAA ACCGCAGTGG CGTGCCGAGC ACCTGATTCT GGAGGGAGAA
TCCGGAACAC GACCGCCACA GGCTGGGTAC GTGTACCTGT CGCTGGCGGG AAACCGCACG
CAGCAGGAAC GGCGCCAGCA TGCACGGCGC GCCATCGAGG CCGGGCTGGG CGTACCGGCC
CTGCGCAATC TTCTGCAGGA CTTGCCCACG CCAACCCAGC GCCCATCTCG TCTTCCGGGA
CTCACTGTCT ACGCACGCCA GAGTTTTAAG AGCGGCCGTG CCACGGACAA GCAGGAAGAA
GCGATCCGCG TGGCGCTGAA CACACCGGAC GTCGCGCTGA TCATCGGCCC GCCAGGCACG
GGCAAGACCC AGGTGATCGC GGCACTGGAG CGAAGACTCG CTGAACTCAA TGAGGGTCAG
GTGATTGCGC AAGAAGTGCT AATTTCCAGC TTTCAGCATG ATGCCGTCGA AAACGCGTTG
GACCGCACCG ATGTCTACGG TCTGCCAGCG GTGAAAGTAG GGCGATCGAG CCGACAAGAA
GGAGTCGACC CAGTACAGGC GTGGTGTCAC AAACACGAGG TGATTCTCGA TAAACGCCTC
GATGAACTTA GTAGCCAGGA GCCCACGCAG GCCCTTTTGC AGCAATTGGG CAAACTGCTC
AACAGTCTGC TGATCCTGGG CACGCCTTCA TCTCGGCGCG AGGAATCCTT TCTGGCCTTG
GAAGGCTTGC TGGCCCGACT CGCGACCGAG GCCCGCATCC GGCCATCATC GCGCTGGCAG
ACGGACTGGG AGGCATACCG CGAGCATGCA GCCGACCAGC CGACCAGCGG TCACGACCTG
ATGCCGGGGC GGCGCAGGCA GTTGACGCGC CTGGTGCGCG GATTGCGCAC CCTGGCGAGC
TCGTTCGAAG ACGATGGGCC GCAGCGCGCC CGCATTGCAC TGGGGCTGCT CCAGGAAGTG
CCTGGCCTGC TGACCCAGCA AGACAAGGCG CTGCTGCAAC GTGCCTCCAG CCTGAACGCC
GTGGAGCCAA CACTGCTGGC AGAACTTGCC GTCCTGCGTG ACCAGTTGCT CGATCGGCTG
CGCCCTGACT CGCGTTCTGC GACTGTTCGT TCGCAGTTCG ACGCATCAAC TCTCGCGCTG
CTGCAACGCT TGCACACAGA ACTGGCTGAC AAGGTGGCGG CCACGCGCCA CCATCAGTAC
GGGGTACTGG AACGCTACCG AGATGCCTTT CGTTCCCACC CAGGCTGGGT GCGCAAGGCG
ATCGAAAACT ACAGCAGCAT CGTGGGGGCC ACCTGCCAGC AGTCAGCCAG CCGCCAGATG
AGCGAGCTGA AAAATACGGC TGGCGACTCC ATGGCCGGCA TGCAGTTCAC CAGCGTGGTG
ATCGACGAGG CGGCCAGGGC CAATCCACTG GATCTGTTTA TTCCGATGGC TTTGGCCAAG
CGACGCATCG TGCTGGTGGG GGACCACCGC CAGCTCCCGC ACCTGCTCGA TACGGACATC
GAGGAAGACA TCCGTGCCGA GCGGGGCGAT CAGGTGCACA GCAACACCTA CAAGGACAGC
TTGTTTGAGC GCCTGTGGCG CCAGTTCAAG CAGCGCGAAG CGGCCGATGG TTTTTCGCGT
GTGGTGATGC TCGACACCCA GTTTCGCATG CATCCCAGGC TGGGAGATTT CGTCAGTCAG
CAGTTCTACG AGAACGCCGG CTTGGGCAAA GTGCACTCTG GGCGCAAAGC CGAAGACTTC
ATCGCAGAAG TACCTGGCTT TGGCGGGGCC GTGTGTGCCT GGAGGGATGT GTCTGCAGAG
GCAGGCCGCG AGGAGTCTCA TGGCACCAGC CGGCGCCGCC GGCCAGAGGC GAAGCAGGTC
GCCCGGGAGG TCCAGCGCCT ACTGACGGTA TTGCAGCAGG ACATGAGCGT GGGGGTTATC
ACCTTTTATG CAGCCCAGCG CGACTGCATT TTCGAGGAAC TCGCTGGGCT TGGCATCTCC
GAAAAAGGGG AGGGTGGCTG GCGGGTGCGT CCCGAGCATG CGGCCAATGT GCAGTGCGCC
GAGCGGCTGC GCATCGGCAC GGTGGATGCC TTCCAGGGCA AGGAGTTCGA TGTGGTGGTG
CTGTCAGTGG TACGCAGCAA TCCACTGCCT CTGGGCTTGC GTGAAGAGGC GGACAGCGAA
GAGGCTTATG AAAAGCCAGC CAGCCGCAAG TACGGCCACC TGCGCACCTC GAATCGCCTG
AACGTGGCCA TGAGCCGCCA GCGTCGGCTG CTGGTGGCTG TGGGTGATCA GGCCATGTTC
AGCGGCAAGG CGGCCTGCCA GGCCGTCCCC GAAATGAACG CCTTTCTGGA ACTTTGCCAA
CAGGAGGCTC AGCATGTCAG CGCCTGA
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| Protein sequence | MKLQETPFML KDLLGARVTA RDFDPTQWQV GQEVVLRLRQ DELLLRQNDQ VTALALTSES
GSMDFHAQNL DALWLLVRVK PGMVWLQCLV PMQTCQCEPG LDFGADQRTA DSLHQQQLIG
QPDIAEAMRW LMEEFVCTTE DGSSSRVFMA IHARQDQRQM QLVGRRYVVD LKRDAEQALW
VERIAKRRRE SDEPFALLNG HNRFVDASQG MQAQTGAQRA ILDAAVNSFG TYLELWHLYG
QKEWDKDVQR ASELKALRYS ACQPASEEGG GWRLSVQRDE LKEFSQRWRT LAGDDDQLEI
DEDAPDWSSE HYTDLSVRDK RRLFRGKPQW RAEHLILEGE SGTRPPQAGY VYLSLAGNRT
QQERRQHARR AIEAGLGVPA LRNLLQDLPT PTQRPSRLPG LTVYARQSFK SGRATDKQEE
AIRVALNTPD VALIIGPPGT GKTQVIAALE RRLAELNEGQ VIAQEVLISS FQHDAVENAL
DRTDVYGLPA VKVGRSSRQE GVDPVQAWCH KHEVILDKRL DELSSQEPTQ ALLQQLGKLL
NSLLILGTPS SRREESFLAL EGLLARLATE ARIRPSSRWQ TDWEAYREHA ADQPTSGHDL
MPGRRRQLTR LVRGLRTLAS SFEDDGPQRA RIALGLLQEV PGLLTQQDKA LLQRASSLNA
VEPTLLAELA VLRDQLLDRL RPDSRSATVR SQFDASTLAL LQRLHTELAD KVAATRHHQY
GVLERYRDAF RSHPGWVRKA IENYSSIVGA TCQQSASRQM SELKNTAGDS MAGMQFTSVV
IDEAARANPL DLFIPMALAK RRIVLVGDHR QLPHLLDTDI EEDIRAERGD QVHSNTYKDS
LFERLWRQFK QREAADGFSR VVMLDTQFRM HPRLGDFVSQ QFYENAGLGK VHSGRKAEDF
IAEVPGFGGA VCAWRDVSAE AGREESHGTS RRRRPEAKQV AREVQRLLTV LQQDMSVGVI
TFYAAQRDCI FEELAGLGIS EKGEGGWRVR PEHAANVQCA ERLRIGTVDA FQGKEFDVVV
LSVVRSNPLP LGLREEADSE EAYEKPASRK YGHLRTSNRL NVAMSRQRRL LVAVGDQAMF
SGKAACQAVP EMNAFLELCQ QEAQHVSA
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