Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4144 |
Symbol | |
ID | 4685416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | - |
Start bp | 18910 |
End bp | 19692 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639826008 |
Product | 4-oxalocrotonate decarboxylase |
Protein accession | YP_973173 |
Protein GI | 121582731 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.246439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTG AACTGATCGA AACCCTGGGC GACGAGCTGT ACCACGCTAT GACCACCCAA ACCGTGGTCG AGCCGCTGAC GACTCGCCAC CCCGACATCA CCATCGAGCA CGCCTACCAC ATCCAGCAGC GCATGATCTC GCGCCGCCTG CAGGCCGGCG AGCGCATCGT GGGCAAGAAA ATCGGCGTCA CCAGCGCGGC CGTGATGAAC ATGCTGGGCG TCTACCAGCC CGACTTTGGC TACATGCTCG ACGGCATGAT CGTCAGCGAC GGCGGCAGCA TCGCCATGTC TTCCCTGATC CAGCCCAAGG CCGAAGGCGA AATCGCCTTC GTCCTGAAAA AAGACCTCAT GGGTCCCGGC GTCACCAACG CCGACGTGCT GGCCGCCACC GACTTCGTCA TGCCCTGCTT CGAGATCGTC GACTCGCGCA TCCGCGACTG GAAAATCAAG ATCCAGGACA CCATCGCCGA CAACGCCTCC TGCGGCATGT TCGTGCTCGG CAGCACCGCC ATGGACCCGC GCAAGCTCGA CCTGATGACC TGCGGCATGG TGCTGGAGAA AAACGGCGAG ATCATCGCCA CCGGCGCCGG CGCCGCCGCG CTGGGCTCGC CGGTCAATGC CGTGGCCTGG CTGGCCAACA CCCTGGGCCG CCTGGGCATC GGCCTCAAGG CCGGCGAAGT AATCCTCTCC GGCGCACTGG CCGCCATGTT CCCGGCCAAA GCGGGCGACC ACTTCCGCGT CACCATCGGC GGCATCGGCG GCTGCTCGGT GCGTTTTCAC TGA
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Protein sequence | MTPELIETLG DELYHAMTTQ TVVEPLTTRH PDITIEHAYH IQQRMISRRL QAGERIVGKK IGVTSAAVMN MLGVYQPDFG YMLDGMIVSD GGSIAMSSLI QPKAEGEIAF VLKKDLMGPG VTNADVLAAT DFVMPCFEIV DSRIRDWKIK IQDTIADNAS CGMFVLGSTA MDPRKLDLMT CGMVLEKNGE IIATGAGAAA LGSPVNAVAW LANTLGRLGI GLKAGEVILS GALAAMFPAK AGDHFRVTIG GIGGCSVRFH
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