Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4079 |
Symbol | |
ID | 4688640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4359135 |
End bp | 4359935 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639837092 |
Product | amidohydrolase 2 |
Protein accession | YP_984291 |
Protein GI | 121606962 |
COG category | [R] General function prediction only |
COG ID | [COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.357402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCTG ATGTGTCAAA AACCGCCGTC GATACGCATT TCCATGTTTT CAGGGCGGGC ATTGCCCAGG CCGGAGCGCG CTACGCGCCG GCTTACGATG CGCCGTTTTC AAGCTGGCAA GCCAACGCTC AGCCGCTGGG CGTGGGTCGC GGCGTGCTGG TCCAGACCAG CTTCATGGGC AGCGACAACA CGCAGCTGGT CGCTGAACTG GAGCGATGGC CAGGCGTCTT GCGCGGCGTC GCGGTGGTCG GGCCGGAGGC GACGCTTCAA ACGCTGCAGC CATTGCACCG GGCTGGCGTG CGCGCAATCC GGCTGAACCT GGCGGGCGTT TCGCATGCAT TGCGCGAATG GTCAAAGGCC GCCCCGCTGT GGGACGCGCT GGCCTTGCTC GGCTGGCATC TGGAACTGCA CACCGACATC GGCCGCTTGC CGGAGGTGCT TGCGCAACTG CCCGGCGAGC TGCCACTGGT CATTGACCAC ATGGGCAAGC CCGAGGCGAT CTCGGCTGAT GACGCAACGG TGCGGGCCTT GGCTGAGCGT GCCCGGCGCA GCAACGTGCA TCTCAAGCTC AGTGGCGCCT ACCGGCTGGG GGGATTGAAC CCAGGCGAAC TGTCGCGCCT GTGGCTCGGC GAGCTGGGCG CCGGCCGCCT GCTGTGGGGC AGCGACTGGC CATGCACGAA CCACGAATCG CTGGCGGACT ACCCCGGGCT GCTCAATTCC CTGCACGAGT GGCTGGGCGA TGAAGCGGTC ATCGAGACGG TACTGTCCAC CAACCCCCGG CGCCTGTATT GGGGTGATTG A
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Protein sequence | MFSDVSKTAV DTHFHVFRAG IAQAGARYAP AYDAPFSSWQ ANAQPLGVGR GVLVQTSFMG SDNTQLVAEL ERWPGVLRGV AVVGPEATLQ TLQPLHRAGV RAIRLNLAGV SHALREWSKA APLWDALALL GWHLELHTDI GRLPEVLAQL PGELPLVIDH MGKPEAISAD DATVRALAER ARRSNVHLKL SGAYRLGGLN PGELSRLWLG ELGAGRLLWG SDWPCTNHES LADYPGLLNS LHEWLGDEAV IETVLSTNPR RLYWGD
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