Gene Pnap_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4002 
Symbol 
ID4686442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4266583 
End bp4267041 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content70% 
IMG OID639837016 
ProductMerR family transcriptional regulator 
Protein accessionYP_984215 
Protein GI121606886 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA CAAGACCCCT GCGCCTGATC GGGAAAGCCG CCGCCCTGAG CGGCGTCAGC 
GCCGCCAACA TCCGTTTCTA CGAGGCCCAG GGCCTGCTGG CGGCCGGCCC GCGCTCGGCC
AACGGCTACC GCAGCTACAC CGACGGCGAC ATCCACCAGT TGCGCTTCAT CCGCCTGTGC
CGGGCGATGG ACATGTCGCT CGATGAAGTC CGCACCCTGC TGAACCTGGA CCTGGCCCAG
AAAGCCGACT GCGCGGCGGC GAACGCCGCG CTCGAATCCC ACATCGCGCA TGTCGGCGAG
CGCTTGGCCG AACTGCAGGC CCTGCAGCAA GACCTGGTGC AGCTGCGCGA CTGCTGCGAC
GGCAGCGGGC CGCAGTGCAA AATCATGCAG GCGCTGCACG ACCGCGCCGC GCACCTGCCG
CGCGAAGAGG CGAAGTCGCG CGCGCACCGG CATGTGTGA
 
Protein sequence
MPATRPLRLI GKAAALSGVS AANIRFYEAQ GLLAAGPRSA NGYRSYTDGD IHQLRFIRLC 
RAMDMSLDEV RTLLNLDLAQ KADCAAANAA LESHIAHVGE RLAELQALQQ DLVQLRDCCD
GSGPQCKIMQ ALHDRAAHLP REEAKSRAHR HV