Gene Pnap_3994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3994 
Symbol 
ID4686200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4260639 
End bp4261079 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID639837010 
Productresponse regulator receiver protein 
Protein accessionYP_984209 
Protein GI121606880 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.73116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.876977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAT TCATTACTTA CGTGGTTGAA GACAATCCGA CCGTCCTGTC CAATCTGGTA 
GAAGCGCTGA GCGAGATAGC CCATGTGAAA GTCACCGCGC ATTCGGCCAC GCAGTCCGAA
GCAAGCCAGT GGCTGGAACG GCATCACGCC CACTGGCATT TGGCCATCGT CGATCTGTTT
TTAAAGCAGG GCACGGGGCT GGGCGTGCTG GCGGCTTGCC GTAATCGCCA GCCGCACCAG
AAAATGGTCC TCCTGACCAA CTACGCCACG CCGGAAATCC GGCTGCGGTC GGTGGCGCTG
GGGGCTGACG CCGTCTTTGA CAAATCGACC GAACTCGACG ACCTGCTGCT CTACTGCATC
AAGCAGACCC ACAAGCTCAC GCAGGACCAT GGCCAGGAGA CGCAGCGCAA CGTCCTTTCA
CACCCGCGCC AGTCGAACTA G
 
Protein sequence
METFITYVVE DNPTVLSNLV EALSEIAHVK VTAHSATQSE ASQWLERHHA HWHLAIVDLF 
LKQGTGLGVL AACRNRQPHQ KMVLLTNYAT PEIRLRSVAL GADAVFDKST ELDDLLLYCI
KQTHKLTQDH GQETQRNVLS HPRQSN