Gene Pnap_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3957 
Symbol 
ID4688191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4221724 
End bp4222221 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID639836974 
ProductMarR family transcriptional regulator 
Protein accessionYP_984173 
Protein GI121606844 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.432771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0893513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA CCACCATTTC AAGCGCCCAT GCCGGCTACG ACACCAGCTG GCGCCTGACC 
CATCTGGGCC GGCTGATGGG TGAAGCCCTG CGCCGTTTTG ACGAGCGCGT ACTCTCGCTC
ATGGCCAGCA ATGTGGAAGT ACCGCTGGCG CTGTCCAACC TGGCGGCGCG CGACCAGGTC
GGCGCGGCGC ACATCCACAT CACGCGCCAC CTGGCCGTCG GCGGCTCGCG CCTGACCGAC
CTGGCGCTGA GTGCCGGCAT GAGCAAGCAG GCCATGGGCG ACCTGGTCGA TCAGTGCGAA
GCCTGGGGCA TCGTCAGGCG CGACGCCGAT CCGCATGACC GGCGCGCGCG GCGCGTGGTG
TTCACCGAAT CCGGCCTGGC CTGGCTGGAA GCCTTCCGCT GCGCCGTGGT GCAGGCCGAA
GACGAGTTCC GCCAGGCCGT GGGCGACGAT GTCGCGACCG TGGTGGCGCT GGGGCTCGAA
GCGTACGCCG TGCCTTGA
 
Protein sequence
MHETTISSAH AGYDTSWRLT HLGRLMGEAL RRFDERVLSL MASNVEVPLA LSNLAARDQV 
GAAHIHITRH LAVGGSRLTD LALSAGMSKQ AMGDLVDQCE AWGIVRRDAD PHDRRARRVV
FTESGLAWLE AFRCAVVQAE DEFRQAVGDD VATVVALGLE AYAVP