Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3928 |
Symbol | |
ID | 4689177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4192453 |
End bp | 4193028 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639836946 |
Product | resolvase domain-containing protein |
Protein accession | YP_984145 |
Protein GI | 121606816 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.272515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000753359 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGGTC AAAATGTTGG ATACGTTCGT GTTTCGACCA TCATCCAAAA TACCGCCCGA CAACTGGATG GTGTTTCCCT TCATAAAATT TTCGAAGACA AAGCATCCGG GAAAAATGTT GACCGACCAC AATTGACAGC ATGCCTTGCC CATCTGCGCG AAGGTGACAC GCTTCACGTT CACTCAATGG ACCGCCTCTG TCGCAATCTT GATGACCTTC GCCGCATTGT CAAAGACCTG ACCAGCCGTG GAGTCTTGGT CAGATTTCAC AAAGAAGGTC TTTCATTCAC GGGTGAAGAT TCGCCCATGT CAAATCTGCT GTTGTCGATG CTGGGTGCCG TTGCCGAATT CGAACGGTCC ATCATCCTTG AACGTCAGCG TGAGGGCATC CAAATTGCAA AGGTCGAGGG TAAGTACAAA GGTCGAAAAG CTTCGCTGAC CAAAGAGCGG GTTCTTGAAC TTCAGCGTCG TGCTGGTGCT GGAGAGAAAA AGACTGTCCT TGCTCGGGAG TTCGGAGTCA GCCGGGAAAC CGTGTACACG TATCTAAATA CTGAGAAATC AGCCAGTGTC GGGTAA
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Protein sequence | MTGQNVGYVR VSTIIQNTAR QLDGVSLHKI FEDKASGKNV DRPQLTACLA HLREGDTLHV HSMDRLCRNL DDLRRIVKDL TSRGVLVRFH KEGLSFTGED SPMSNLLLSM LGAVAEFERS IILERQREGI QIAKVEGKYK GRKASLTKER VLELQRRAGA GEKKTVLARE FGVSRETVYT YLNTEKSASV G
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