Gene Pnap_3763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3763 
Symbol 
ID4689748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4015913 
End bp4017166 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID639836781 
Productmajor facilitator superfamily transporter 
Protein accessionYP_983980 
Protein GI121606651 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCG AGCTGAACAA TTCAAGAAAA GCGTGGTCGG TGCTGATCGT CAGCACGCTG 
GCCTTCACCG TCTGCTTCAT GGTGTGGATG ATGTTTGGCG TCATCGGCAT CCCGATCAAG
AAAATGCTGG GCCTCAACGC CACCCAGTTT GGCCTGCTGA CCGCCACGCC GGTGCTGACG
GGCTCCTTGA TCCGCGTGCC GCTGGGCATC TGGACCGACA AGTACGGCGG GCGCATCGTC
ATGGCCGTGC TGATGGCCAT CACCGTGCCA GCGATCTGGA TGATGAGCTA CGCCACCCAG
TACTGGCATT TCATCACCAT CGGCCTGTTC GTCGGCCTGG CCGGCGGCTC GTTCTCGGTC
GGCACGCCGT ATGTGGCGCG TTGGTTTCCC AAGAACCGCC AGGGCACGGC GATGGGCGTT
TATGGCGCGG GCAACTCGGG CGCGGCGGTC AACAAGTTCG TCGCGCCGGT GCTGCTGGTG
GCTTTCGGCT GGGCGATGGT GCCGCAGGTG TATGCGGCCA TCATGCTCGG CACCCTGGTG
CTGTTCTGGA TGTTCAGCCA CAGCGACCCG AAGCACCTGG TGCCCAGCAA TGTCAGTTTC
AGGGACCAGC TCAAGGCGCT GAAAGACCCC AAGGTTCTTA AATATTGCCA GTACTACAGC
ATCGTGTTCG GCGGCTATGT CGCGCTGTCG CTGTGGATGG TGCAGTACTA CGTCGGCGAA
TACGGCCTGG ACATCCGCAC CGCCGCGCTG CTGGCGGCCT GCTTTTCATT GCCCGGCGGC
GTGCTGCGCG CGGTCGGCGG TGTGCTGTCG GACAAGTACG GCGCGCACAG CGTGACCTGG
TGGGTGATGT GGGTGAGCTG GATTTGCCTG TTTTTGCTGT CCTATCCACA GATGGACTTC
ACGCTGCTGA CCGTCAACGG CCCCTCGACC TTTCACCTCG GCCTGAACAT CTACGCCTTC
ACCGGACTGA TGGCCGTGCT GGGCGTGGCC TTCGCCTTTG GCAAGGCCAG CGTCTTCAAG
TACATCAGCG ACGACTACTC GCACAACATC GGCGCCATCA GCGGCATCGT CGGCCTGGCC
GGCGGGCTGG GCGGCTTCGT GCTGCCCATC CTGTTCGGCG CGCTGATGGA CCTGACCGGC
ATCCGCTCCA GCGCTTTCAT GCTGATGTAT GGCGTGGTCT GGGTATCGCT GATCTGGATG
TACTGGACCG AAGTGCGCCG CACCGAAGTC ATGGGCCGCC ACGCGGCCGT CTGA
 
Protein sequence
MASELNNSRK AWSVLIVSTL AFTVCFMVWM MFGVIGIPIK KMLGLNATQF GLLTATPVLT 
GSLIRVPLGI WTDKYGGRIV MAVLMAITVP AIWMMSYATQ YWHFITIGLF VGLAGGSFSV
GTPYVARWFP KNRQGTAMGV YGAGNSGAAV NKFVAPVLLV AFGWAMVPQV YAAIMLGTLV
LFWMFSHSDP KHLVPSNVSF RDQLKALKDP KVLKYCQYYS IVFGGYVALS LWMVQYYVGE
YGLDIRTAAL LAACFSLPGG VLRAVGGVLS DKYGAHSVTW WVMWVSWICL FLLSYPQMDF
TLLTVNGPST FHLGLNIYAF TGLMAVLGVA FAFGKASVFK YISDDYSHNI GAISGIVGLA
GGLGGFVLPI LFGALMDLTG IRSSAFMLMY GVVWVSLIWM YWTEVRRTEV MGRHAAV